Calliphora vicina (urban bluebottle blowfly): 135952311
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Entry
135952311 CDS
T10781
Symbol
SoxN
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor mef2A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvj03000
]
135952311 (SoxN)
Transcription factors [BR:
cvj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135952311 (SoxN)
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135952311
NCBI-ProteinID:
XP_065358259
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All DBs
Position
2:complement(138825861..138828595)
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AA seq
817 aa
AA seq
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MLTMESDMKGGILHATMPPHHASAALHGHAASPYSALGPLMNLGQSHLTQSHLSHHHQHH
MTSHLASQSSAAGNGTSSALSSLQNSMAQTLNGNAVQQQQQHNSPLHSSSDLSPTQSSHT
SVGSHHMTSPGQSHHHGSHHHSGGMGGQSTPLSSSGSSGNGNINNNNNSSAANKNAQNAA
ERVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSETEKRPFIDEAKRLR
AVHMKEHPDYKYRPRRKTKTLTKTKEKYPLGVGGLMQSSEPSTPTARTSSANSISSAAQQ
AASVNRDMYPMSAPNGYMPNGYIMHDPSAAAYQSQHGAYMGNYHRYDMGQMHQAAAAAGS
LNYMNAAGSGYGMYSTVSGGQTSPYGNIQQPGSPYGGGSAQPQPGSPYGHSGQPGSQVSC
QSHSPSDSSVKSEPVSPSPMHSSGPTSAQQNSASAAVITNNNHIMKREYVSAQQPSSELN
HLMNMYHLPDGMQASAAAAVAAAEHHQRNLMHYQNSSPDLQQHQAHQHHQQSMRSMAPLA
HMXEMASAYGGHATLPTVSASAEVNPCSGLSLTTIPAPPSNHTGHHHNNSSSSINNNNNS
SLRQQQDEQLHLVDTDNANINQQQQQRLQQNELLSNHLPPTHHQLNSGISVTENLTNGEG
RSNGALAMQSFTINQLNGRSSPTASGSSGGGSRSSAHSLPSHSPALHLSNHNAQYQTQHG
SLDPCSPTTVVTSAAIMGRLTAGCVDTLGNAGSTAGFTTVDGCGNDTLSLLQHHHHHPHS
HHFSYSTLTPPPHHHHHHHHPHHHPHDAPGLLDISTL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccatggaatcagatatgaaaggtggcatactacatgccaccatgccgccacat
catgcatcggctgccctgcatggtcatgccgcctcaccttatagtgctttgggtcccctc
atgaacttgggccagtcacacctgacacagtcacatctatcgcaccaccaccaacatcac
atgacttcacatttggccagccaaagttcggccgccggcaatggcacctccagtgccttg
agttcgctgcaaaacagcatggcccagactttgaatggcaacgcggtacaacaacaacaa
cagcacaattctcccttgcatagctccagcgacttgagtcccacccagagctcacacacc
agcgtaggcagtcatcacatgacctcgccaggacaaagtcatcatcatggctcacaccac
cattcaggcggtatgggcggtcaaagtacccctctcagctccagcggtagttctggtaat
ggcaatatcaacaacaataataattcctcggccgccaacaaaaatgcccaaaatgccgcc
gagcgtgtcaaaagacccatgaatgcttttatggtgtggtctcgtggccagcgtcgcaaa
atggcctcggacaatcccaaaatgcacaacagtgagatttccaaacgtttgggtgcccaa
tggaaggatctatcggaaactgaaaagcgtccgttcatcgatgaagccaaacgtttacgt
gccgtgcacatgaaggagcatcccgactacaagtatcgtccacgacgcaagacaaaaact
cttaccaagaccaaggagaagtatcctttaggtgtggggggtctcatgcaatcgtcagag
cccagcacacccaccgccagaaccagttcagccaactcgatctcgtcggcagcccaacag
gcggccagtgtgaatcgtgatatgtatcccatgagtgctcccaatggatatatgcccaac
ggctacataatgcacgatccctcggcggccgcctatcaaagtcaacatggagcctacatg
ggcaactatcaccgctacgacatgggacaaatgcatcaggctgctgcagcagcgggttcc
ctcaactacatgaatgccgctggcagtggttatggcatgtatagtacagtttccggcggt
cagacctctccctatggcaacatacaacaacctggctcaccgtatggcggcggcagtgct
caaccacaacccggctcaccgtacggccactccggccagcctggttcacaagtctcctgc
caaagtcacagtcccagcgattcgagtgtgaaatcagaacccgtctcgcccagtcccatg
cacagctcgggccccacatccgctcaacagaattccgcctccgccgccgttatcaccaac
aacaaccacataatgaaacgggaatacgtgagtgcccagcagccgtcttcagaactcaac
caccttatgaacatgtatcacctgcccgatggtatgcaagcttcagcggccgctgctgta
gccgccgccgagcaccaccaacgcaacttaatgcactaccaaaacagttcgcccgatttg
caacagcaccaggcgcaccagcatcatcagcagtcgatgcgtagcatggctccactggcc
catatgtgagaaatggcaagtgcatacggaggacatgctacgctgccaacagtttctgct
agcgcggaagttaatccctgcagtgggctatccctaacaacaattcctgccccgccgtct
aaccacaccggacaccatcacaacaacagcagcagcagtattaacaacaacaacaacagc
agcctaaggcaacaacaagacgaacagttgcatttggtggacacggataatgccaacatc
aaccaacaacaacaacaacgtctgcaacaaaacgaactgctgtccaatcacttgccgcct
acgcatcatcagttaaactcaggtatttctgtaacagaaaacttaacaaacggcgaagga
cgttcgaatggtgcgctggctatgcagagctttacaataaatcagcttaatggacgctcc
agtcccacggcctcgggttcttccggtgggggcagccggtcatcggctcattccctaccc
tcacattcacccgcactgcaccttagcaaccacaatgctcagtatcagacacagcatggc
tcgttagatccctgtagcccaactacggttgtgacatcggctgccattatgggccgtcta
acggccggctgtgtggacacactgggcaatgctggttcaacggccggctttaccacggta
gatggctgtggcaatgatacattgtctttactgcagcatcatcaccatcatccacattcc
catcatttttcctattccactctaactcctcctccccatcatcatcatcatcaccaccat
ccacatcatcatccgcacgatgcaccaggactgttggatatatccactttgtaa
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