Calliphora vicina (urban bluebottle blowfly): 135952579
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Entry
135952579 CDS
T10781
Symbol
tho2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135952579 (tho2)
09122 Translation
03013 Nucleocytoplasmic transport
135952579 (tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135952579 (tho2)
03041 Spliceosome [BR:
cvj03041
]
135952579 (tho2)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135952579 (tho2)
Spliceosome [BR:
cvj03041
]
Complex C
Other components
EJC/TREX
135952579 (tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135952579 (tho2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
135952579
NCBI-ProteinID:
XP_065358666
LinkDB
All DBs
Position
2:complement(43254488..43274623)
Genome browser
AA seq
1693 aa
AA seq
DB search
MRRLRKPSAKGKSGDETTAATTNLEVVKASVAGSIEIGGHTSSASTETHAGANINLEHNS
PTKSSKAGGGTVVTPAKLRSRRNIMDTNGGSSSSLTPSTATASLGKEVFKHFEKSGKSEF
LKYLKQHVRDNDSPYMGKQNDFKFGVSSAIYDLLWQGVRCNLKKDTVLNTLGEVVTLHDD
FPSLILDVINVLDAETSLMTDGIQEERLMFCQILKELDKVIPDKLIKERLEIDTLQEVGI
VKNKVFYTKFIKIKTKLYYKQRRFNLFREESEGYAKLITELNQEFEDDVTSDSIMDIIKS
LIGCFNLDPNRVLDIILESFESRPERWQLFIPLLRAYMPNGSIICEVLGYKFRYFADSKT
PRTLFHVCSLLLKYGVIDLNDIYVWLTPTDKIITGDWEQDLADAKEFVRKLNIIITNKDK
EPAEPEPEKEYSLEKYFANQKFGLCEGLLKVGDWDNALKIIKKLPEQSVVVHEPIARALA
ELIHIGIDHVYRKQCFKISPAAKLQKRRLADDSKLVQKIQAKEFNELRNYVVPMVVALGP
SLHFDTVLMYKLIRIMRTIITEMGVDNQNLPSVNSEAETLYNEVMTIMDSAILPALSYLD
CNCPMAEEIWTVLKHFPYHYRYALYGRWKNDTYQLHPQLIRRRGNAQKNIKAIMKRVSKE
NVKPLGRLIGKLSHCAPGFLFDYILLQIQIYDNLIGPVVDSLKYLTLLSFDCLGYCLIEA
LTMADRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELSGLLQYVANQLKSQKSLDLLIL
KEIVQKMAGVESAEEMTNEQLNAMCGGELLRGEAGYFSQVRNTKKSSQRLKDALANNDLA
VTICLLMAQQKHCVIYRETAQSHLKLVGKLYDQCQDTLVQFGTFLGSTYSVDEYVERLPS
IIAMLQEYHINADVAFFLARPMFTHQINQKYDQLRKADPNAKKLTNNQKLSKYLDATNLI
MNPIVESVRPLHGPKVWEDISPQFFVTFWSLSMYDLQVPHDSYQKEITKLKQLSNQAADS
KDSNASKNKKEQERYIALMDKLQDERKKQQEHIDKILQRLQQQKDNWFLSRSAKSAKNET
ITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKAANFSTLLCYDRIFCDITYSVTSCTE
NEATRYGRFLCAMLETVMRWHSDQATFNKECANYPGFVTKFRVSNQFSEANDHVGYENYR
HVCHKWHYKITKAIVFCLDSKEYMQIRNALIILMRILPYYPVLAKLAQIIERKVEKVREE
EKNKRPDLFVIASSYIGQLKTKAAQMIKESDFHQVTERPQRSESGVGVTLGSGASTAATI
VQNILSSSQATGSISLVAVQPPTTQQPTVDIKPPSNGEIKIEKREKERLERPTKIIKLNS
SSSLTSERGGERESSSSNRLTLIEIKDEPSTSNSTSVSHERDLDRHGSSTRSLKDIIKKD
ERLRERDRDREQRDREREHRNQLLEDLEASASRSKREKRREDRYRNESPSMETLENVSSK
NDYDRGERETRDRDYERNERRDRDRDRDLSSVSNESIGSLQPQRRSQDALEYEKDSKRRK
MESSSSNSKKQLIDDHNEPSKKERSVKNKERKEKLTDEEKDARKERKLGRKRERLEETSS
TEHKRRRDVQNGDDDQQQQRERDKYHTREKSPHIRDIRERSHEKFERDRSNRDDRSYSSS
STTNKSTRSRIGY
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtttgcgaaaaccgtctgcaaaaggcaaaagtggcgacgaaacaacagcagca
acaacaaaccttgaagtggttaaagcgtcagtagcaggctcaatagaaattggtggtcat
acaagtagtgccagcacagaaacgcatgccggtgccaatatcaacttggaacataactcg
ccaacaaaatcgtctaaagctggtggtggcacagtggtgacaccagctaaactacgctct
aggcgcaacataatggacacaaatggcggcagcagtagcagcttgacaccatcaacagct
acggccagtctcggcaaagaggttttcaaacattttgaaaaatctggaaaaagtgaattt
ttgaaatacttaaagcaacatgtacgtgacaacgacagtccatatatgggaaaacaaaat
gactttaaattcggtgtctccagtgccatctatgatttgctgtggcagggtgttcgttgt
aatttgaaaaaggatacggttctgaatacactgggtgaagtggtgactcttcatgatgat
tttccctccttaatactggatgtgattaacgttttggatgcagagacttcacttatgacg
gatggcatacaagaagaacgcttaatgttttgtcaaattctcaaggaactggataaggtt
atacccgacaaattgatcaaggagagattggaaatagatacactgcaggaagtgggcata
gttaagaataaagtattctatactaaattcattaaaattaaaacaaaattatactacaag
caacggcgttttaatttattccgtgaagaaagtgagggttatgccaaacttattaccgaa
ttaaatcaagaattcgaagatgatgttacctccgatagcataatggatataattaaatct
ttaattggttgcttcaatttggatcccaatcgtgttttggatattattttagaatctttt
gaatcccgtcccgaacgctggcaattgtttatacccttgttaagggcttatatgcctaat
ggctcgattatttgcgaagttttgggttataaatttcgttattttgctgattctaaaact
cctcgtactttatttcatgtttgttctttgttgctcaaatatggtgttatcgatcttaat
gatatttatgtttggctaacacccactgacaagattattactggcgattgggaacaagat
ttggccgatgctaaagaatttgtgcgtaaattgaatattattattaccaacaaggataaa
gaacctgcggaaccagaaccagaaaaggaatatagtttggaaaaatactttgccaaccaa
aagtttggcttatgtgagggactcctcaaagttggcgattgggataatgctcttaaaatc
ataaaaaaattacccgaacaatcggtggtggttcatgaacccattgcaagagcgctagct
gagctcattcacatcggcattgatcatgtatatcgcaagcaatgctttaaaatatcacca
gctgctaaattgcaaaaacggcgactagccgatgactcaaaactagtgcaaaagatacaa
gcgaaagaatttaatgaactacgaaattatgttgtacccatggtcgtagccttaggaccc
tcattgcattttgatacggtactaatgtataaattgatacgtataatgcgtacaattatc
acagaaatgggtgtagataatcagaatctgccatcggttaatagtgaagctgaaacttta
tacaatgaggtaatgaccataatggattctgccatactgccagcattatcatatttggac
tgtaattgtcccatggctgaggaaatatggacggtgttgaaacattttccctatcattat
cgttatgctttatatggccgctggaaaaatgatacttatcaattgcatccccaacttata
aggcgtcgcggcaatgctcaaaaaaatattaaggccattatgaaacgtgtgagcaaggag
aatgttaaacctttgggtagacttattggtaaattaagtcattgtgctcctggttttcta
tttgattatattttattacaaatccaaatctatgataatttgattggtcccgtggtagac
tctttgaaatatttgacacttttgtctttcgattgtttgggttattgtttgattgaggct
ttaaccatggccgatagagatcgtttcaaacatgatggcacctccatatcactgtggctg
caaagtttagcctcattctgtggtgccattttcaaaaagtacaacattgaattgagtggc
ctgctgcagtatgtggccaatcaattgaagtcgcaaaaaagtttggatttattaatttta
aaagaaattgtacaaaaaatggctggtgttgaatcggccgaggaaatgaccaacgaacag
ttaaatgccatgtgtggtggcgaattacttagaggagaggctggttactttagtcaagtt
cgtaatacgaaaaaatcatcacagcgtctaaaagatgcattagctaacaacgatctcgct
gtaaccatatgcctgttaatggcccaacaaaaacattgtgtcatctatagagagacagca
caaagtcatttgaaactagtgggtaaactatacgatcaatgtcaagatactttagtgcag
tttggtacattcctgggatcaacatattcggtggatgagtatgtggaaagattaccctca
ataatagccatgttgcaagagtatcatataaatgccgatgtggctttctttttggccagg
cccatgtttactcatcagataaatcaaaaatacgatcaattacgcaaagccgatccaaat
gccaagaaactgaccaacaatcaaaagttatcaaaatatctggatgccaccaatttgatt
atgaatcccattgtggaatcagtacgtcccctgcatggccccaaagtatgggaggatatt
tcaccacaattctttgtaacattttggtctttaagcatgtatgatttgcaagtaccccat
gatagttatcaaaaggaaattacaaaacttaaacaattatcaaatcaagcagcagactct
aaggattctaacgcgtccaaaaacaaaaaggaacaagaacgttacattgcccttatggat
aagctgcaggatgaacgcaaaaagcagcaagagcatattgacaaaatcttacaacgtctg
cagcagcaaaaggataattggtttttatctcgttcagccaaatcggctaaaaatgagact
ataacacagtttttacaattgtgtctatttccaagatgtactttcactgccctggatgcc
ttgtattgtgctaaatttgttcatactatacataatttaaaggctgcaaatttctccacg
ttattgtgttacgatcggatcttttgtgacatcacctactccgtaacgtcctgcactgag
aatgaagcaacacgttatggtcgctttttgtgtgccatgctggaaactgttatgcgttgg
cattcagatcaggccaccttcaacaaagagtgtgccaattatcccggtttcgtgacaaag
ttccgtgttagtaatcaattttcggaagccaacgatcatgtgggttatgaaaattaccga
cacgtatgtcataaatggcactacaagatcaccaaggccatagtattttgtttagactcc
aaggaatacatgcaaatacgtaatgctctcatcattttgatgcgtattttaccctactat
cccgtattggcaaaattggctcaaattatcgagcgtaaggtggaaaaggtgcgcgaagaa
gagaaaaataaaagaccagatttatttgtaattgcctcgtcctacattggccaattgaag
acgaaagcagctcaaatgattaaggaaagtgattttcatcaggtaaccgaaagacctcag
aggtcagaatcaggtgtaggcgtaacattgggctcaggagcaagcaccgcagccacaatt
gtgcaaaatatattaagtagttcacaggctacaggttcaattagcttggtggcggtacaa
ccccccactacacaacagccaactgtggatataaaaccgcccagtaatggagaaataaaa
atagaaaaacgtgaaaaggaacgcttagaacgtcccacaaaaattatcaaactaaattca
tcttcgtcattgacctctgaacgtggcggtgaacgggaatcttctagttcaaatcgtctg
actctaattgaaattaaagatgaaccttcgacgtcaaattcgacttcagtttcgcacgaa
cgtgatttggatcgacatggcagtagtacgcgctccttgaaggacatcatcaagaaggat
gaacgtttacgtgaacgggacagggatcgtgagcaacgtgatcgcgaacgggaacatcgt
aatcaactgttggaggatttggaagcgtcagcatcgcgttcgaaaagagaaaaacgccgt
gaggatcgctatcgcaatgaatcgccatcaatggagaccttagagaatgtgagcagtaaa
aatgattatgatcgtggtgaacgtgagacaagagatcgtgattatgagcgcaacgaacgt
agagatcgagatcgtgaccgtgacttgagttcggtctcgaatgaaagtattggctcgtta
cagccacagcgacgtagtcaagatgctttagaatatgaaaaagactccaaacgtcgcaaa
atggaatcctcatcatccaattcaaagaaacaacttatagatgatcataatgagccgtcg
aaaaaagaacgtagtgtcaagaataaagagcgcaaagaaaagttaaccgatgaggaaaaa
gatgcccgaaaggaaagaaaattgggacgcaaacgtgaacgtttggaagagacctcatca
acagagcataaacgtcgtagagatgtacaaaatggtgatgatgatcagcagcaacaacgt
gaacgtgataaatatcataccagagaaaaatcaccgcatataagagatatacgtgagaga
tcccatgagaaatttgaacgtgatcgtagcaatcgtgatgatcgttcttatagcagcagt
agtacaaccaataaatccactagatcccgcattggttattaa
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integrated database retrieval system
