Calliphora vicina (urban bluebottle blowfly): 135952671
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Entry
135952671 CDS
T10781
Symbol
Rhau
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135952671 (Rhau)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135952671 (Rhau)
03012 Translation factors [BR:
cvj03012
]
135952671 (Rhau)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135952671 (Rhau)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135952671 (Rhau)
Translation factors [BR:
cvj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135952671 (Rhau)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
PhoH
ABC_tran
T2SSE
NB-ARC
ATPase
AAA_7
AAA_11
AAA_16
Rad17
nSTAND1
SRP54
Motif
Other DBs
NCBI-GeneID:
135952671
NCBI-ProteinID:
XP_065358761
LinkDB
All DBs
Position
2:28926339..28930736
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AA seq
955 aa
AA seq
DB search
MSEHRRGRGGRGGRGGGGGRPPPWLKGKDIGLFYRDRQRQRNTEEESNGRIKLNPSVDIP
SGVLTQVESCLHEFEGDHEDERVCDEFAQHFRSLLNVNFEEFLEKSKSTVRNTLDHINLE
ASNERLKSTLLDKEESFEYRKRFDMRRRLPAMKQKDDILKAIEENQIVLVVGSTGCGKTT
QVPQILLDEFTNRGRGAECRIVCTQPRRISAISVAERVAYERDESLGSSVGYQIRLENRL
PRDYGSILYCTTGILLQKMQTNPLMISINIIVLDEIHERSVETDLLMALLKKILPHRPDL
KVILMSATVSEETFCEYFNNCFTLHIEGTLFPVEVLYLEDILQETGFTGFQKPAHAQNSH
GRGGRKRDGGDAERNNQYSQMISTYLPSLQGKYSRQVVDTIRQYKDTEGCENLIFLEHLI
FHICETKPPGAILVFLPGFERISKLTTQLQKPSSARYRELSQKIQVYPLHSMMPTVNQKN
IFKPAPQGMRKVILSTILAETSVTIDDVVYVINTGKTKNKDYDVSQNLQTLEEQWVSKAN
TQQRKGRAGRVQPGICYNLFTRMRERLMFEVPIPEILRSKLESIILNLKLLHISNPYEFL
KTLISVPQEKAISHGLTLLKRIEALDDNDNLTPLGLHLARLPIDPQMAKMILMSALFRCL
DPITSAAAGLSYKSPFYTPMGLEKKVDAIKRELSDNSKSDHLLIHSVIEGYRDAKDNDCN
MNYCYENFLSHTTLTQIENMKRQFADLLKNSSFLETSNCCGKSSNVNSSNVPLLRAIIAA
GLYPNIAFLRQVKQRGNRCHAVHKMSTPEDNRVNFHPSSINSGQTSFDSNYFVYLQKQKS
KSVYLLDATMVFPMALLIFGDGVKKGITSDNQHYISVANKYFFKCNEKSSLFILSLREKL
GILLQKKALYPSPIEINSKDEKLIKAIQILLSLDDAGDHMDQFLSTDDEDDATTP
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacatcgtagaggacgtggtggacgaggaggtagaggcggtggtggtggacgt
ccaccaccctggttaaaaggtaaagatattggtttattttaccgcgataggcagcgacaa
cgcaatactgaggaagaaagcaatggtcgcattaaacttaacccttctgtggacattcca
tccggtgtactgacgcaagtggaaagttgtttgcatgaattcgaaggcgaccacgaagat
gaacgtgtttgtgatgaatttgcacaacatttccgtagcttgcttaatgtcaatttcgag
gaatttcttgagaaatcaaagagtacggttagaaacacactcgatcacattaatttagag
gcaagcaatgagcgtttaaaatcaactctattggataaagaagagtcctttgaatatcgt
aaacgtttcgatatgcgtcgacgtttgcccgccatgaagcagaaagatgacattttaaag
gccatagaagaaaatcaaattgttcttgtagtgggtagtactggatgcggcaagactaca
caagtgcctcaaatactgctagatgaatttacaaatcgaggtcgtggggctgagtgtcgc
atagtgtgtacgcaacctagaagaatatcggcgatttcagtggcagaacgtgtggcttat
gagcgagacgagtcattgggttcttcagtgggatatcagatacgtttggaaaatcgcttg
cctcgagattatggctcaattttatattgtaccactggcatcttattgcaaaaaatgcaa
acaaatcctttaatgattagtattaacatcatagtattggatgaaattcatgaacgtagt
gtggaaacagatcttttgatggctttacttaaaaagattctacctcatcgccccgatctt
aaagtgatactaatgagtgccaccgtttcggaggaaacattctgtgaatatttcaacaat
tgctttacactacatattgagggcactctatttcccgttgaagttctctaccttgaggat
attttgcaggaaaccggttttactggatttcaaaaaccagcacatgctcaaaactctcat
ggtcgcggaggacgtaaacgtgatggtggagatgctgaacgcaacaatcaatattctcaa
atgatatcaacttacttgccgtcattacaaggcaaatacagtcgccaagtagtcgatact
atacgacaatacaaagatactgagggttgcgagaatttaatatttttggagcatttaatt
ttccatatttgtgaaacaaagccgccgggagcaattttagtatttttaccaggtttcgaa
agaatctccaaattgactacacaattgcaaaaaccctcatcagccaggtatagagaattg
tcgcaaaagatacaagtatatccgctgcactcaatgatgcccacagtaaatcaaaagaac
atatttaagccagccccccaaggcatgcgtaaagttatattatcaactattttggcggag
acctcagtaacaatagatgatgtggtttatgttataaatacgggtaaaactaaaaacaaa
gattatgatgtgtcacaaaatctgcaaacattagaggaacagtgggttagtaaagccaat
acgcaacagcgtaaaggtcgtgctggcagagtacagccgggtatatgttataatttattt
accagaatgcgcgaacgccttatgtttgaagtgcctataccggaaatattacgcagtaaa
ttggaatctattattttgaatttaaaacttttgcacatatccaatccttatgaattttta
aagactcttataagtgtgccacaggagaaagccatcagtcatggtttaactttattaaaa
cgcattgaagccttggatgataatgataacttgactcctttgggcttgcatttagcacgc
ttacccattgatccccaaatggctaaaatgattttaatgtctgccctctttcgctgtctc
gatcctataacatcggctgcagctggtttgtcttacaaaagtcccttctatacgcccatg
ggtttggaaaaaaaggtggacgccattaagcgtgaattgtcggacaattcaaaaagtgat
catttattaatacacagtgttatcgagggctatcgtgatgccaaagacaatgattgtaat
atgaactattgctatgagaattttcttagccacaccactttgacacaaattgaaaatatg
aaaagacaatttgcagatttattgaagaattcaagttttttggaaacttccaattgttgt
ggcaaaagttcaaatgttaattcgtcgaatgtgcccttgttgagggccattattgctgcc
ggtctttatccaaatatagcatttttaaggcaagtaaaacaaagaggtaatagatgtcac
gctgttcataaaatgtctactcctgaagataatcgtgtaaatttccatccttcctccatt
aacagtggccaaacttcttttgattctaactactttgtttatttgcaaaaacaaaaatcc
aaaagtgtgtatttattagatgccaccatggtttttcccatggctttgttaatatttgga
gatggtgtgaaaaagggcataacttctgataaccaacattacataagtgtggcgaataaa
tatttctttaaatgtaatgaaaaatcctcattgtttatattgagtttgcgtgaaaaactt
ggtatattgctgcagaagaaggctttgtatccctcgcccatcgaaatcaacagcaaggat
gagaagcttataaaggctatacaaattttgctctctttggatgatgcaggcgatcacatg
gatcagtttctatccacagatgatgaagacgatgctacaacaccttga
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