Calliphora vicina (urban bluebottle blowfly): 135953098
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Entry
135953098 CDS
T10781
Symbol
Cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03015
mRNA surveillance pathway
cvj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135953098 (Cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135953098 (Cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135953098 (Cpsf6)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135953098 (Cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
135953098
NCBI-ProteinID:
XP_065358839
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All DBs
Position
3:complement(34898458..34908050)
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AA seq
689 aa
AA seq
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MADGVVLDLYAEDLDKDFSAQNQDEFAADGVDLYDDIGAPPEAAVTTAVTVTSVIGGESP
GQAGSGPDGTGAAGSNGVYHQGSGSLAPNQVGRRFQLYVGNLTWWSTDQDIANVMRDIGV
TDFQEVKFFENRANGQSKGFCVVSLGSEASLRLVLERLPKKELHGQAPVVTYPTKQALNQ
FESLQKTRPVPPPQQNGPPRGPTPGGPLMPGGPMPPHPGAPQGVPPGHQPRLMNPNMPPG
QFRPQHMPPQGPPVGPNSGPPRMQQPPMHQGPPMVPQQGMQGPPRFGQQQPQWPGQPRPN
GPRPGPLNGPPQRPQMFQGPPGGMPMRGPRPDWRPPMHGGFPPQGPPGGPPQGPPHMQGP
PRGPPGGPPQMGGPGGPPPGGPHSGPGGPAPHVNPAFFNQPGGGPPQHPGGPPMAGGPPH
GPPGPGPQQGMNMPPQHGPPPHFAQQGAPRGPWPGPPGPVKPQGPFPDQAALGPQLSEAE
FEEIMGRNRTVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERCKILISSL
QDTLHGIETKSYNRRERSRSRERSHRQRPRRERSSSRYRERSRERERDRERDRDRDAGYR
ERSRSRERERPSTNDHYRDDSSSRSARARKSPEQPSGDPSNEVPSKRGYYEERYRGSDRE
RERDRDRDRERDRDRDRERERDREHRSRH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggcgtggtgttagatctctacgccgaagacttggataaagacttttctgcc
caaaatcaggatgaatttgctgccgatggcgttgatttgtatgatgatattggtgcacct
ccagaagcagctgtcactaccgcagtaactgttacttcagttattggtggtgagagtccc
ggccaggcaggtagtggtccagatggcactggtgcagccggctcaaatggagtttaccat
caaggcagtggtagcttggctccaaatcaagtgggacgtcgttttcaactatatgtaggc
aatttaacatggtggagcaccgatcaagacattgcaaatgttatgcgtgatattggtgta
acagatttccaggaagtaaaatttttcgaaaatcgcgcaaacggccaatctaaaggcttt
tgtgttgtctccttaggctcggaggctagcttacgtttggtattagagcgtttacccaaa
aaggaattgcatggccaggcgccagttgttacatatcctacaaagcaggccttaaatcag
tttgagagtctacagaaaacacgaccagtaccaccaccacagcagaatggcccgccacgt
ggcccaactcctggtggaccactgatgccaggcggtcctatgccaccacatcccggagca
ccccaaggagtgccacctggacaccagccacgactaatgaaccccaatatgccaccaggc
caatttcggccacagcatatgcccccacaaggacctccagttggtccaaattcaggacca
cctcgcatgcagcaaccacccatgcaccaaggaccaccaatggtaccgcaacaaggtatg
caaggtcctccaaggtttggtcagcaacaaccgcagtggccaggacaaccacggccaaat
ggtccacgaccgggaccgttaaatggaccaccacaacgtccacaaatgttccagggacca
ccaggtggtatgccaatgcgaggcccccgtcccgattggaggccacctatgcatggtgga
tttcctcctcaaggtccacccggtggcccaccacagggtcctcctcatatgcaaggtcca
cctaggggtcccccaggtggcccacctcaaatgggtggtccgggtggaccgcctcctggt
gggcctcatagcggaccaggcggtcctgctcctcatgtcaatccagcattctttaatcaa
ccaggtggaggaccaccacaacatcctggcggccctccaatggcaggtggaccaccacac
ggcccacccggtccaggtcctcaacagggaatgaatatgcctccacaacacggcccacca
ccgcacttcgcccaacaaggtgcaccacgtggtccttggccgggtccaccagggcctgtc
aaacctcaaggtcctttccccgatcaagccgccctagggccacaactgagcgaagctgaa
tttgaagaaattatgggtcgtaatcgcactgtaagcagttcggctattgctcgtgctgtc
tctgatgcggccgctggtgaatattccagtgctattgaaactttagtcacagcaatctca
ctgattaaacaatcgaaagtggcacatgatgaacgttgcaagatcttaataagttccctg
caggacactttacatggcattgaaacaaagagttacaacagacgtgaacgctcccgatca
cgtgagcgatctcatcgccaaaggccgcgtcgggagagatcttcgtcaaggtatcgtgaa
agatcgcgggaaagagaacgtgaccgcgaacgagatcgcgatcgtgatgctggttatcgt
gaacgtagcagaagtcgtgaacgtgaacgccctagcactaatgatcactacagagatgac
agctccagccgatctgctcgcgctcgtaaatcaccagaacagccaagcggtgatcccagt
aatgaggtaccctcaaagcgaggttattatgaagaacgttaccgaggatctgatcgtgaa
agagaacgtgaccgcgatcgtgatcgcgagcgtgatcgtgaccgcgatcgtgagcgcgaa
cgtgatcgagaacatcgttcaaggcattaa
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