| Entry |
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| Symbol |
PAN3
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| Name |
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
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| KO |
| K12572 | PAB-dependent poly(A)-specific ribonuclease subunit 3 |
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| Organism |
cvj Calliphora vicina (urban bluebottle blowfly)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cvj00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135953199 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cvj03019]
135953199 (PAN3)
Messenger RNA biogenesis [BR:cvj03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135953199 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
135953199 (PAN3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(19102884..19206382)
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| AA seq |
743 aa
MSTFLNNFFPADTAAMDPIFYSPSNGIPSESKLATYMNRHNVATPTYGINAGFTLLNMDS
PLSIKSQVTPQSPEFIPTRINSSPNFYSPYHTPMLNGVAAGSNVNGITPTSTAAKSVNGT
PSMLGLQKATAAAVAQQKQLQQQQKHSLVNGGTKQIGQPSAQQGYVGMTTTPLKGGRNSL
LRNESPSSIGEKSPPRMTPHASPIPTTLPANVHQENVGGTIYFYPTANHTTSQNSNTVGV
PSGVVDPTSAHHGGPPVVGVGMPPLTPVQPSLMYTGHVYPGPASNVITMQPKTQLESAFF
LPDEMRAEILSRNVISNLMLDASEAAQHALPMEIDNYHTLYPLEALPVQPLHAKLTLPSS
TYKATHSSTGIKYCLRRLHGFRLQSTKCMSVVEMWKKLQHSNVVQLREVFTTKAFGDNSL
VLVYDYHPNSHTLLTKYFTPTPDSNGYNDPFQGEARPFSHKSNLQRSSNGPLLSEATIWS
IIMQLTAGLRAIHQAGLACRVLDPTKIIVTGKRVRFSFCGTSDIAQFDPNATNPLAVVSM
HQQEDLTALGRLVLALACRCLQSVQRDNVQSSIEMVSRHYSSDLRNFIVYLFTTTQRRSV
TDLMPMIGARFYTQLDALQAQCDMQEDELAKEMENGRLYRILVKLNCINERPDFNLDCTW
SEIGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSLERVQLMSRDEQSVLI
VTYVELKNCLEKAFSELMANAAT |
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| NT seq |
2232 nt +upstreamnt +downstreamnt
atgtcaacgttcttaaataatttcttcccagcagatacggctgctatggatccaattttt
tattccccatcaaatggcataccttctgaaagtaaactcgcaacatatatgaatcgacac
aatgttgcaacacctacttacggtataaatgctggctttactttgctaaacatggactca
cctttgtcgattaagtctcaggtaacaccacaatcgcccgaattcattccaacacgtatc
aattcatcgcccaacttctattcgccatatcatactccaatgttaaatggtgtagcggcc
ggtagtaacgttaatggtataacgcccacaagtacagcagctaaatcggtaaatggtaca
ccctctatgttgggtctacaaaaagcaacagccgctgccgtggcacaacaaaaacaatta
caacagcagcaaaaacacagcctcgtcaacggtggcacaaaacaaatcggtcaaccgagt
gcccaacaaggatacgtaggcatgacaacgacaccattgaaaggtggacgcaatagtttg
ctgcgcaacgaatcaccctctagtataggggaaaaatcaccgccacgcatgacaccgcac
gcatcccccatacccaccacattaccagccaatgttcatcaggaaaatgttggcggtact
atatatttttatccaactgccaatcatacgaccagccagaatagcaacaccgtcggcgtg
cccagcggcgttgtggatccaacgtccgcccatcatggcgggccgccggttgtgggcgtt
ggcatgccgcccttaacgcccgtccagccatcgctcatgtatacgggtcatgtgtatccc
ggtcctgcctccaacgttataacaatgcaaccgaaaacacaattggaatcggcattcttt
ctacccgacgaaatgcgagccgaaatattgtcgcgcaatgtgatctcgaatttaatgtta
gatgccagcgaagcagcacaacatgccctacccatggaaattgataattatcatacgtta
tatccgctggaagcgttgcccgttcaaccgttgcacgccaagttaacgctgccctcttcc
acctacaaagcaacacatagttcaactggtatcaaatattgtctgagaaggttacatggt
ttccgtttgcaatcgacaaaatgtatgtcagtcgtggaaatgtggaaaaaattgcaacat
tcaaatgtggtacaattacgtgaagtcttcacaacaaaagcatttggtgataattcatta
gtattagtttacgactatcatccaaactcacatacattattaacgaaatattttacacca
acgccagatagcaatggctataatgatccattccagggcgaggcacgccccttcagtcat
aagagcaatttacaacgttcaagcaatggtcctctattatcagaggcaacaatttggtca
ataattatgcaattaacagctggtttacgtgcaattcatcaagctggcttagcctgcaga
gttttagatccaacaaaaataattgtgactggtaaacgagtacgttttagtttttgtggc
acaagtgatatcgcacagtttgatccaaatgctacaaatcctttagctgttgtcagcatg
caccagcaggaggatttaactgctttgggtcgtttagtattagcattggcttgcagatgt
ttacagtcggtacagcgtgataatgtacaatcaagcattgaaatggtctcacgtcattac
tcctccgatttgagaaattttattgtttacttatttacaacgacacaaagacgttcggtg
actgatttgatgccaatgattggtgcacgcttttatacacaattggatgccttgcaagca
caatgtgatatgcaagaagatgaacttgctaaggaaatggaaaatggacgtctctataga
atattggtgaaattgaattgtattaacgagaggccagacttcaatttggattgtacttgg
tctgaaataggtgatagatacatgttaaaattattccgtgattatttatttcattccgtc
actgaggatggtcgaccatggttggatcacgcacatattgtacaatgtttaaataaatta
gatgctggctcattagaaagagttcaactaatgtctcgcgatgagcaatcggttcttatt
gttacttatgttgagctcaagaattgcctggaaaaagcattttccgaattgatggccaat
gctgccacataa |
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