Calliphora vicina (urban bluebottle blowfly): 135953286
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Entry
135953286 CDS
T10781
Symbol
HBS1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135953286 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135953286 (HBS1)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135953286 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
DUF2660
Motif
Other DBs
NCBI-GeneID:
135953286
NCBI-ProteinID:
XP_065359179
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Position
3:complement(18316039..18318883)
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AA seq
686 aa
AA seq
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MSRHRIVRTMDYNDEYDGYDDVYDDVYGHSVDDDNCISPTDAQQWLYDRARGQNSMSSFM
RDNKDIAEEEEGEADEDADKSYDKNRRDSDNFQMPVLNDMEQAQLTSCIDEVRSVVGDTV
SEKRIVETSIKFGYDITKILDEILNDECENKAKRLQQEAPNVLLKGPGPRKLALGELDKS
AASAPIVKVTAAQGEVKRGFEISSPLLQSSPAVSGRNTPVDISEDSAKKLPADNLALFKV
SKEQAQRDNKQLYTKERADQKHHFHMIVIGHVDAGKSTLMGHLLFDTGNVSQRVMHKHEQ
ESKKLGKQSFMYAWVLDETGEERARGITMDVGHFRFETDSKVITLLDAPGHKDFIPNMIS
GATQADVALLVIDATRGEFESGFDLGGQTREHALLVRSLGVNQLGVVINKLDTVGWSKER
FDEIVQKLKGFLKQAGFKESDVSYTPCSGLTGENLTKPSTEEALTSWYKGPHLLAVIDSF
KIPERSIDKPFRMSVSDIYKGTGAGFCISGRIETGVLAINDKVLVGTLREQAQVKSLLID
EMPQNTVFAGDQVSVTLSGIDVNNIMVGNIICDPQHPIPVTTRFQARILVFNVKVPITIG
FPVLLHHQSLIEPAVISKLNAQIHKGTGEVVKKKPRCLGNNSCALVELETTRPICIERYA
DFKELGRVMLRVSGVTIAAGMITKIR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcacagaattgtacggaccatggactacaacgacgagtatgatggctatgat
gatgtctatgatgatgtctatggtcattccgtagatgatgacaactgtatttcaccgaca
gatgcacaacaatggctgtatgatcgcgcacgaggtcagaattcaatgtcatcatttatg
agggacaacaaagatatagccgaagaggaggagggcgaggcagacgaagatgctgacaaa
tcttatgataaaaaccggcgggattcggataattttcaaatgccggtcttaaatgatatg
gagcaggcccaactgacctcttgcatcgatgaggtgcgcagtgtggtaggcgacacagtg
tccgagaagagaattgtggaaacatcgattaaatttggctatgacataactaagattttg
gatgaaattctaaatgatgaatgcgaaaacaaggcgaagagattgcaacaagaggcacca
aatgttttgcttaaaggccccggcccacgtaaacttgctttgggtgagttggataaatct
gctgcatcagcccccatagtaaaagtaacagctgcccaaggtgaagttaagcggggcttc
gaaataagttctccattgttacaaagttcaccagctgtttcgggtcgcaataccccagtc
gatattagtgaggattctgcaaagaagttgcctgccgacaacttggctttgtttaaagtt
tctaaagagcaagcacaacgagacaacaaacaattgtacaccaaggaacgtgccgatcaa
aagcatcatttccatatgattgtcattggtcatgtggacgccggcaaaagtacgcttatg
ggtcatttattgttcgacacgggcaatgtgtctcaacgagttatgcacaaacatgaacag
gagtctaagaaattgggcaaacagagttttatgtatgcttgggtattagatgaaactggc
gaggagagagcaagaggtattaccatggatgttggacattttcgttttgagactgacagc
aaagttatcactttactagatgctccagggcataaagattttatacccaacatgatatcg
ggagccacacaagctgatgttgctttattagtcatcgatgccacaagaggagaatttgag
tctggtttcgatttgggtggccaaactagagagcatgccttgttggtgcgttctctgggt
gtcaatcaattgggcgtggtgatcaataagctagatacggtgggttggtccaaagaacgt
tttgatgaaattgtacaaaaacttaaaggtttcctaaaacaagctggcttcaaagaatca
gatgtttcttatacaccctgttccggccttaccggagagaatttaacaaaaccctctacc
gaggaggctttgacctcatggtataagggacctcatcttctagccgtcatagacagtttt
aaaatacccgagcgttcaatagacaaacctttccgcatgtcagtgtcggatatttataaa
ggaactggcgcaggattttgcatttcaggacgcattgaaacaggtgttttggcgatcaat
gacaaagtgttggtgggaactctcagggaacaggctcaggttaaaagtcttctaatcgat
gaaatgccccaaaataccgtatttgcaggtgatcaagtctcggttactttgtcgggcata
gatgttaacaatattatggtgggcaatatcatatgtgatcctcaacatcccatacccgtg
accacacgttttcaagcacgcattctggtcttcaatgtcaaagtacccattaccattggc
ttcccagtgctgttgcatcaccagtccctaatcgaaccggctgttattagtaaacttaat
gctcagatccataagggtacaggagaagtggttaagaagaagccccgttgtctgggcaat
aattcgtgtgctctagtcgagttggaaaccacacgtccgatttgtattgagcgctatgct
gacttcaaggaattgggacgcgtcatgttacgtgtttcgggtgttaccattgcagctggt
atgattacaaaaattcgctaa
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