Calliphora vicina (urban bluebottle blowfly): 135953307
Help
Entry
135953307 CDS
T10781
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135953307 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvj03009
]
135953307 (smid)
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
135953307 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
TIP49
nSTAND3
AAA_28
AAA_33
RNA_helicase
AAA_2
NACHT
AAA_18
Mg_chelatase
Rad17
AAA_17
NPHP3_N
TsaE
IstB_IS21
Parvo_NS1
NB-ARC
Viral_helicase1
Sigma54_activ_2
AAA_7
ABC_tran
nSTAND_NTPase5
ATPase
Vps4_C
Cytidylate_kin2
AAA_11
Motif
Other DBs
NCBI-GeneID:
135953307
NCBI-ProteinID:
XP_065359205
LinkDB
All DBs
Position
3:complement(57166000..57176549)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKKTKPVLYDPLIINRVKQYLEENIDKTYLDVGVMTKHLQDRYPEYTRRKVAPFRALVEQ
AYHVVSQSYGLNDPTGSGDESDASDLEVMDDSSSNNIMSNMMSSLYNNGPKTKSTAATSS
NTTAKQQSGEAIDISSDESGDEGNPTKSNGKSLAKIAVANLPLVKNSAITVTKLPLNPER
PSNKGSSSTASTTTDSNSLPPLQPLQQQQQQQQQSGHKRHENVSGTATSGGGQPTKKRKL
DETGKHTTIYTKNPMSNQFHKLDKHDNGSNPYILQQMLRHNQQQRHHQLDNHRENSNDPE
RPFPNHGSGQRSRKYKKEVQLRKSRESFQDIGGMEKTLKELCELLMHIKSPDIYFVLGLM
PPRGILLHGPPGCGKTLLAHAIAGQLNLPLIEIPATELIAGVSGESEERIRDVFDQAATS
APCVLFIDEIDAISSNRSMAQRDMERRIVSQLISSLDNLKLSEGGQSVLVIGATTRPDVL
DPALRRVGRFDHEIAIGIPTRKDRKDILTIICEGLSVEPKCDFDKIAELTPGYVGADLLA
LVSRAATIAVKRKCSEQMRAFQLKTQRNITIVDLDDDTEEAENKTEKDKEKEKDKETEKD
NTKEADVADEAASKADEQTKETKKTEKTDEAAEPMAVDTTTDEAAKPDAEKPAESEATSS
KDKSDDVEMNDTTKSSDAVVEPAEKSKDDSITNKNEETEKLKLHDPTLFELLNWLDNPPE
DITFVSEFCITLDDFCDAVKVVQPSAKREGFITVPDVTWDDVGSLQDIREELKLAVLAPV
KFPEKLARLGLSAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESER
AVRACFQRARNSSPCVIFFDEFDSLCPKRSDGNEGGSGTRVVNQLLTEMDGVEDRQGVYI
LAATNRPDIIDPAILRPGRLDTILYVGLPELQDRVEILKANTKSGTKPVLAADVSFDELA
CLTDGYTGADLAGLVRQASMLALKESINNTELKLDDLCVNQSHFRKAIHMLRPSVSAQDR
KVYDKLRLKYAAPRVPIADESVV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccaagcccgtgctgtatgatccactaattattaatcgagtaaaacagtat
ttggaagagaatattgataaaacatacttggatgtgggtgtaatgaccaaacatttgcaa
gatcgctatcccgaatacacaagacgtaaagtagcaccatttcgggcattagtggaacaa
gcttatcacgtggtttctcaaagttatggtttaaatgatcctacaggtagtggagatgaa
tctgatgcctcagatctagaagttatggatgactcatcatctaacaacataatgagcaat
atgatgagcagtttatataataatggtccaaagaccaaatcgactgccgctacttcgtcg
aataccaccgccaaacaacaatctggcgaagccattgacattagcagtgatgagagtggg
gatgaaggtaatcctactaaatcaaatggcaaatctttagcaaaaatagcggtggctaat
ttgccgttggtaaagaattcggcaataactgtgacaaagttaccactaaatcctgaacgg
ccatcaaacaagggatcatcgtccacagcctcaactacaacagattccaattctttgccg
ccattacagccactccaacaacaacaacagcagcaacagcagtcgggccataagcgccat
gagaatgtatcgggaacggcaacaagcggtggaggacagccgacgaaaaaacgtaagttg
gatgaaactggtaaacatacgactatctatacgaaaaatcctatgtcaaatcaattccac
aaattagacaagcacgacaatggcagtaacccctatatactgcagcagatgctgcggcac
aatcagcagcaacgtcatcaccaattagacaatcaccgggagaatagcaatgatcccgaa
cgtccctttcccaatcatggcagtggtcaacgttctcgcaaatacaagaaagaggtacaa
ttgcgcaaatcacgagaatctttccaggatattggtggcatggaaaaaactctcaaggag
ttgtgtgaactcttaatgcatattaagtcgccagatatatactttgtgttgggcctaatg
ccgccaagaggaattttgttgcatggtccaccgggctgtggtaaaactttattggcccat
gccatagcagggcaattaaatctacctcttattgagataccagctaccgaattaattgct
ggagtttctggtgaatctgaagaacgcatacgcgatgtatttgatcaggcggccaccagt
gcaccttgtgttttgtttattgatgaaatcgatgctatatcctcgaatcgttcaatggcc
caaagagatatggagcgtcgcattgtttctcaactgattagcagtttggacaatttaaaa
ctgagcgagggtggtcagtcggtgttggtcattggagccactacacgaccggatgtactt
gatcccgctttaagacgtgtgggtcgttttgatcatgaaattgctataggtatacccaca
cgtaaagatcgtaaagacattttgacaataatatgcgagggtttgtcggtggaaccaaaa
tgcgattttgacaaaattgccgaattgacaccaggttatgtaggagctgatctattggcc
ctagtatctcgcgcagccaccatagctgttaaaaggaagtgctctgaacaaatgcgtgct
ttccagcttaagacccagcgtaatataaccattgttgatttggatgatgacactgaggaa
gctgagaacaaaactgaaaaagacaaggaaaaggagaaggacaaagaaaccgaaaaggat
aataccaaagaggctgatgtagctgatgaagctgcctctaaggcagacgaacaaactaaa
gaaactaaaaaaactgaaaaaactgatgaggcagccgaaccaatggcggttgatactacc
acagatgaggcagcaaaacctgatgcagagaaacctgctgaatctgaggccacatccagc
aaagacaaatccgatgatgtcgaaatgaatgataccaccaagtcatcagatgctgttgtt
gagccggctgaaaaatcgaaagatgacagtattacaaataaaaatgaagaaactgagaaa
cttaaactgcatgatcccactttgtttgagctgctaaactggttggacaatcctcccgaa
gatatcacttttgtttctgaattttgcataactttggatgatttctgtgatgctgtgaaa
gttgtgcaaccctcggccaaacgtgaaggttttattactgtacccgatgttacctgggac
gatgtgggctctctacaagacataagagaagaattaaaattggctgttttggctccagtt
aagtttccagagaaattggcacgtttgggtctttcggcaccctcgggtgtcttattgtgt
ggtccacccggttgtggcaaaactcttttggccaaggcaatagccaatgaggcaggcatt
aatttcatttccgttaaaggtcccgaattaatgaatatgtatgtgggtgagagtgaacgt
gccgtcagggcatgctttcagagagctcgtaattcttcaccttgtgttatattctttgat
gaatttgattctctgtgtcccaaacgttccgatggcaatgaaggtggttcgggtactcgc
gtggttaatcaattgttgactgaaatggacggtgtcgaagatcgccaaggagtatatata
ttagccgctactaatcgtcctgacatcattgatcccgccatcttacgtcccggacgtttg
gatactattttatatgtgggcttgccagagctgcaagatcgtgttgaaatcttaaaagcc
aatacaaagagcggcaccaaacctgttttggctgcagacgttagcttcgacgagttggct
tgtttgacagatggctataccggcgccgatttggctggtcttgtacgccaggcttctatg
ttggctcttaaagagtctataaataataccgaattaaaattggatgatttgtgtgtgaat
caaagccactttagaaaagctattcatatgttaagaccatcagttagtgcgcaggatcgc
aaagtttatgataaacttcgtttaaaatatgccgcaccccgagtaccgatagctgatgaa
agtgttgtttaa
DBGET
integrated database retrieval system
