Calliphora vicina (urban bluebottle blowfly): 135953599
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Entry
135953599 CDS
T10781
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135953599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135953599
03009 Ribosome biogenesis [BR:
cvj03009
]
135953599
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135953599
Spliceosome [BR:
cvj03041
]
Complex A
U1 snRNP components
U1 related factors
135953599
Complex B
135953599
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
Pre-60S particles
Helicases
135953599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Keratin_2_tail
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
135953599
NCBI-ProteinID:
XP_065359629
LinkDB
All DBs
Position
3:complement(26289454..26291819)
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AA seq
581 aa
AA seq
DB search
MSPPKSGNQNASGRGGRPAVGGSRGRGGGFSGNNRGNVRSGRIERNGRPSGSGNMRGGYG
RFGGGNKGLNNNSRNPDDFSNLREINWMQLRLPPFQKNFYKEHPQTASRPMNDVERYRAA
NEITVRGPAPKPIVYFDEACFPDYCMNEIRRQGYNEPTPIQAQSWPIAMSGNNLVGIAMT
GSGKTLAFILPAIVHINHQPPLAKGDGPIALVLAPTRELAQQIKKVADDFGSHVYVRNTC
IFGGTPKTRQTNDLEGGVELVIATPGRLLDFLANGVTNMKRCTYLVLDEADRMLDMGFEP
QIRKILSQIRPDRQILMWSATWPKEVRQLAEDFLGNNYIQINIGSLELSANHNIRQYVDV
CSEVDKGSKLKSLLSNIYDQPQPGKIIIFVATKKKVDELARFINGFGVQVGSIHGDKSQS
DRDNVLTDFRNGRSNILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKQST
GTSYAFFTTKNAKCAKALVDILREANQNVNPDLEYMALNAASILSKEKSDNRANMNGFNN
RGGGGGVRRFGNGGGNYGNNRGGGNNGVGAIRSRNVYNSRK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgcctaaaagcggaaatcaaaatgcgagtggacgaggaggtcgtcctgcagtt
ggtggatctagaggccgtggtggtggattttctggaaataacaggggtaatgtaagaagt
ggtcgtattgaaagaaatggtcgtccttcgggaagtggcaatatgagaggtggctatgga
agatttggaggtggcaataaaggactaaataataattcaagaaatcctgatgatttttca
aacctgcgggagatcaattggatgcagctgcgtttgcctccatttcagaagaacttttac
aaagagcatcctcagacagcatcccggcccatgaatgatgttgaacgttacagagcagcc
aatgaaataacagtccggggacctgctccgaaacctattgtttattttgacgaagcctgc
tttcctgactattgtatgaatgagatacggcgccaaggttacaatgagcccactcccata
caagctcaatcttggcccatagctatgagtggtaataatctggtcggtattgctatgact
ggttccggtaaaactttagctttcattttgcctgccatagttcacataaatcatcagccg
cctttggcaaagggcgatggaccaatagctttggtattggctcctacaagagaattggct
caacaaataaaaaaagtggctgatgatttcggttcgcatgtgtatgtacgcaatacctgt
atttttggtggcacccccaaaacccgtcaaactaatgaccttgagggtggagtggaactg
gttattgcaacacccggccgtttgctagacttcttagctaatggagtaacaaatatgaaa
cgttgtacatatttggtactcgacgaagctgaccgcatgctggacatgggtttcgagcca
caaattcgtaaaatattaagtcaaattcgaccagatcgtcagattttaatgtggagtgct
acttggcctaaggaggttagacaacttgctgaagatttcttaggaaataattatatacag
attaatataggctctcttgaactatcggccaatcataatatccgtcaatatgttgatgtc
tgtagtgaggtagacaaaggatccaaactaaagagtttactatcaaatatttatgatcaa
cctcaaccaggaaaaattataattttcgttgctaccaaaaagaaagtggatgaattggct
cgtttcattaatggctttggagtgcaagtgggttccatacacggtgataagtcacaatca
gatcgcgataatgttttgacagacttccgcaatggtcgttccaatattttggtagccacc
gatgtagcggctcgtggtctagatgttgatggaattaaatatgttataaattttgatttt
cctcaatcctcggaagattatatacatcgtatcggacgtactggccgaaagcagtctact
ggtacatcgtatgcattctttacaactaaaaatgctaaatgtgccaaagcgttggtggat
atactacgcgaggccaatcaaaacgtaaatccggatttagaatatatggctcttaatgct
gcttctatattaagtaaagagaagagcgataatcgagctaacatgaatggttttaataac
agaggtggtggcggcggtgttcgtagatttggaaatggcggtggaaactatggcaataac
aggggtggtggtaataatggcgttggtgccatcagatctcgtaatgtctacaattccaga
aaataa
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