Calliphora vicina (urban bluebottle blowfly): 135953609
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Entry
135953609 CDS
T10781
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135953609 (Ddx1)
03016 Transfer RNA biogenesis [BR:
cvj03016
]
135953609 (Ddx1)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135953609 (Ddx1)
Spliceosome [BR:
cvj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135953609 (Ddx1)
Transfer RNA biogenesis [BR:
cvj03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135953609 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
135953609
NCBI-ProteinID:
XP_065359638
LinkDB
All DBs
Position
3:124661255..124664255
Genome browser
AA seq
727 aa
AA seq
DB search
MTAFEEFGVLPEIGKAIDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLRDLEDGKASKGGGAAGSVAAWTMSFFDRSAALAVTPDGLRCQSREFKEWHGS
RCTTGVKGKGKFYYEATVTDEGLCRVGWATQQANLDLGTCRHGFGFGGTGKKSNNRQFDD
YGEAFGKSDVIGCFLDLERMEVSFSKNGQNLGVAFRIPDNLRNETFYPAIVLKNAEMAFN
FGRTELKYPPKNGFVAVSQAGAEHAKTNPLANPSTNAAANKPAPNAPQAIIIEPSRELAE
QTYNQIEKFKIHLSNPNVQTLLLIGGVKLEQQKSVLQQGVHIVVGTPGRLEEMISSGFVQ
LTHCKFFVLDEADALLKQGYTDLIDRLHKQIPKMTSDGRRLQMVVCSATLHAFEVKKMAD
RLMHFPTWVDLKGEDAVPETVHHVVCMIDPQKDTLWHNLRQHIRTDGVHARDNVFPNNLT
PETYSEAVKLLKGEYCVRAIEEHKMDRCIIFCRTKVDCDNLEQYLKARGGQRYSCVCLHG
DRKPQERKQNLERFKKSEVKFLICTDVAARGLDITGLPYMINITLPDEKSNYVHRIGRVG
RAERMGLAVSLVATVPEKVWYHGEWCKTRGRNCNNTNLTDVKGCCIWYNEKNLLAEIEDH
LNITIQQVDKSLAVPVNDFDGKVVYGQKNLNTGTGYKDHVEQLVPVVRKLTDLELQSQSL
FLKRLKF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaggaatttggagtcttgccagaaattggcaaagccattgatgaaatg
gaatggacgctacccaccgatgtccaggctgaggctatacccctaattttaggtggcggt
gatgtgttaatggctgccgaaactggctctggcaaaaccggtgccttttgtttgcccatt
ttacaaactgtatgggaaaccttaagggatttggaggatggcaaagcatcgaaaggcgga
ggtgcggctggtagtgtggcagcttggaccatgtctttttttgatcgtagcgcagctttg
gcagtaactcccgatggtctgcgttgccaatcgcgtgaatttaaagaatggcatggtagt
cgctgcaccaccggtgtaaagggtaagggaaagttttactatgaggccaccgtaaccgac
gaaggcttatgtagagtaggctgggccactcaacaagccaatctagacttgggtacttgc
cgccatggctttgggtttggtggcactggtaaaaaatcaaacaatcgtcagttcgacgat
tatggcgaggcatttggaaaaagtgatgtcattggttgttttttggatttggaaaggatg
gaagtttcgtttagcaaaaatggacaaaatttgggagtggcttttcgtatccccgacaat
ttgcgcaatgaaaccttttatccagccatagttttgaaaaatgcagaaatggctttcaat
tttggccgaactgaactaaaatatccacccaaaaatggttttgtagcagtatctcaggcc
ggagcagaacatgcaaagacaaatcccttagctaatccctcaacgaatgcggcggccaat
aaaccggcccccaatgcgcctcaggccataattatagaacccagccgagaattggctgaa
cagacatacaatcaaatagaaaagtttaaaatacatttgtccaatccaaatgttcaaact
ctacttttgattggaggtgtaaagttggagcaacagaagagtgtcttgcagcaaggtgtc
catattgtggtgggcacacctggtcgtttagaagaaatgattagcagtggttttgtgcaa
ttaacacattgcaagtttttcgttttagatgaagctgacgctcttctaaagcagggctat
acagatcttatcgatcgtttacacaagcaaattcccaaaatgacttcagatggccgccgt
ctacagatggtggtgtgttcagcaacacttcatgctttcgaggtgaaaaaaatggccgat
cgtttaatgcattttcccacatgggtcgatcttaaaggtgaggatgccgtcccagaaacg
gttcatcatgttgtgtgcatgatcgatccccaaaaagacacactctggcataatttacgc
caacatatacgcaccgatggtgttcatgctcgcgataatgtttttcccaataatttgaca
cctgaaacctattctgaagcggtcaaattactaaagggtgaatattgtgttcgggctatt
gaggaacataaaatggatcgttgtattatattttgtcgtaccaaagtggattgcgacaat
ttggagcaatatttaaaggccagaggaggtcaacgttattcctgcgtttgtctacatggt
gatcggaagccacaagagcgtaaacaaaatctggaacgttttaagaaatcagaagtgaaa
tttttaatatgtactgatgtagccgcaagaggtttagatataaccggattaccctatatg
attaatattactttgcctgatgaaaaatcaaattatgtccatcgtattggtcgtgtgggt
cgtgcggaacgcatgggtttagccgttagtttggtggctacagttcctgaaaaggtttgg
tatcacggcgaatggtgtaaaactcgtggccgcaattgcaacaatactaatttaactgat
gtcaaaggatgttgtatttggtataacgaaaagaatcttttagctgaaattgaggatcat
ttaaatatcacaattcagcaagtggataaatccttggccgtacccgttaatgattttgat
ggcaaggttgtgtacggtcagaaaaatctaaatactggcactggctataaagatcatgtc
gaacaattggtacccgttgtaagaaaactaacagatttggaattgcaatcacaatcttta
tttttaaaacgcttaaaattctaa
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