Calliphora vicina (urban bluebottle blowfly): 135953861
Help
Entry
135953861 CDS
T10781
Symbol
Root
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvj03037
]
135953861 (Root)
Cilium and associated proteins [BR:
cvj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135953861 (Root)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
ERM_helical
Filament
HTH_8
Motif
Other DBs
NCBI-GeneID:
135953861
NCBI-ProteinID:
XP_065359955
LinkDB
All DBs
Position
1:102014919..102026005
Genome browser
AA seq
2057 aa
AA seq
DB search
MQAYRDNFKQTPCPSNLEQPPPSASSRLPFSKGNNNRSRSVNNDYNTNGSIAGAAAVTTP
RMLSPTPSENPGNPSALLRQNQELRQRLAEEANSYRRRLDTYKQAQQNQATLVSRLQSKI
QQYRQRCSDLEDRMQDTIKPVTPCHTPKITTGPTSSQVMCSTSLTLGHSSQPCSSSLETP
PSPPTCGGTGRDFVIHEDSSELCRKLEDEHKKAEQLLAQNNALRQQLIESNHTNEALTND
LQKLTNDWSNLRDELMVKEDEFKEEEQAFKDYYNSEHNRLLKMWREVVAVKRAFKDMQTA
MKNEVAKMGLEVNGAAKDINSTCGNVAFNMQQLKRASDEQLAQAKRENDELQNQLATLKV
QHESARHEILERDQRLLDLVNQLKKLEDRCAQAESQAMLASRYNDEIERLNSSIREIAQA
VVLDAEIADREQAADAATSGGGDTTGGSMQHMHLTRDTTSSASAKSPRRSTARASQAFAE
GTISAVQAALHKYQLALHDMQVKFQNANENLRSTKTQLDTSEGTKALLTTKIHQLTEKLD
ASNSKLSELLKERDSLQKTLDEIRDQKQQSDQGKAEINNAFENLSVDFEKLQFNYGKLQK
KIDALEEDKKAVELEIQRILKDKNITELNLRAEEDRGSRLREETISLREELNRVSLNRDL
LEQQRIESDNIINLLEKQKADLEYDLDKILLEKCDIQERLEKISNNSSSTTDELKILQHN
IHEVQEDRKKITQQLQDQSNELADVRKELSNLDKVRLELETDNLGFSEKVKCLQMEKEKI
LQDLACLTRDRSDIHNQLTALCRKKESLNEELMRTRQRLEQTTETNNRLNRNLEEMVKDV
EEKQVVIDLHEKETHRLQELLAALRSEKESLDAVLFDTNTNLEAVEERRAQIEKELQEAL
VREETLKNHVARLQKDLEQCQRRAQETKTQLLNAAREAENDFNQKIANLKSAAEETGKKH
ADELLQLRNGLEKRMQQALQALQTAKDDEIEKQQERLDALQTHMESLIQQHEEALIRAEN
EKQQALLIAHRDKQAVQEKLEAIARELKNEQDALERAKREHNTRDEKQRSAIAQLKDEIV
AMRTKEEEQKIKLEDCIRKQEIQMNALREERDNLLRLSDELKMDIRLKDDRVESITNELQ
DTLRKAKEGEGYIESLRKDMTDTRRQLADSNIERDKYSDSNKELRDHVKRVESSKREQAR
AIEEALQKISNLEENKNTLENERTRLTTVLKETENNLSKTSQELSSTRNTLQKTQVEFAQ
KDEGGKELQNKLASETELKERAQQELNQVKKQLADLEANLCATRQELGRARCHSNQEEHR
FHNREQELVARIEESRGREKRLEDQKHNLEVCLADATQQIQELKARLGGAEGRIRALDEQ
LACVELHKREIEHKLSSVIHTLRRIAGIQIDGSVNLSHRLVSPSRRFSPVRSVSGGVAPS
CHDFETRSTSHCPDGPALDCDPDLIRKGVRCLMHQVAQIEREKDDYKMQLLTAKKQLQDA
GEQQLKCDSKVSKLQQMIRHLQQEKSNLDTERSMKVSAINALEDKFHKKQDECQQLREKL
AQSEMQLNSCTEENSQNEDRLEKCRQHGAKLENEKRHLQEELAKIEGRATKLDLQRVAME
GDLTRLQMALQEKDCNIRQAQERLDNQGRAMVQLEDRCASLKTALDQMKERLQRAAVVEA
ELRGELKTAHKELTDQGHSTQTNEDKLKLLQKSLQTAENEKRIFAERLEKAQSSINELRR
GQQAQLDSAQRLQDQVNDLEVQRSALESQLRIAKWNQESGDKNNGPNGRNEEDELNRQLK
SSQREKSELRTKLQVLQDKVKQLENERKSKFSGDSVYDRSEKATTAAGGGGIGPNSSASY
YDGNYDSNRLDTNNAGKNDNYLKSSGAAGVGGTFNCGLDHAVIEHENRDLRLKVRRLETL
LAEKESELARCKARIHDSAKCMDGLDSERYRSAQMHAEKLLDAREQAHRQQVLRLENQIS
MLREQLAQEAKRRQQYILRSSKANREMQHLRNTLGDSLRHVSQHPLDPNLLESESRRLDN
AVSMSLPPSTCRDYERD
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatatcgcgataatttcaagcaaacaccttgcccttcgaatttggaacaacca
cctccttccgcctcaagcagactaccattttctaaaggcaacaacaatcgcagccgtagt
gtcaataacgattacaatacgaatggttcaatagccggtgctgcagcagtaacaactccc
agaatgttaagtcctacaccttccgaaaatcctggcaatccatcagctttattgcgacaa
aatcaagagttgcgacaacgcttagccgaggaagccaatagttatcgccgacgattggac
acctataagcaggctcaacagaatcaggccactcttgtgagtcgtttgcagtctaaaatt
caacaatatcgccaacgttgcagtgatttggaggatcgtatgcaggataccattaaacca
gttacaccatgccatacaccaaaaatcaccaccggaccaacttctagtcaggttatgtgt
tcaacttcattaactctgggacactcaagtcagccatgttcctcgtcattggaaacaccg
ccctcaccaccgacatgtggaggtacaggacgagattttgttatacacgaagatagcagt
gaactgtgtcgtaagttggaagatgaacataaaaaagccgaacaattattagcccaaaat
aatgctctacgccaacaactcattgaatcgaatcacacaaatgaggctctaacgaatgat
ttgcagaaactaacaaatgattggtcgaatttgagagatgaactgatggtaaaggaggat
gagtttaaagaagaggaacaggcttttaaagactattataatagcgaacataatcgtctt
ttgaaaatgtggcgtgaagtggttgctgttaaacgagcctttaaagacatgcaaacggcc
atgaagaatgaagtggccaaaatgggtttagaagtcaacggggcggccaaagatatcaac
tcgacttgtggtaatgtggcctttaatatgcagcaactgaaacgtgcctccgatgagcaa
ttggcccaagctaaacgtgaaaacgatgagctgcaaaaccagttggccacactaaaagta
caacacgagagtgcacgtcacgagattttagaacgtgatcaacgtttgttagatcttgtt
aatcaactgaaaaagctagaagatagatgtgcacaggctgagtcacaagcaatgctggca
agtcgctacaatgacgaaatagaacgtttaaacagctcaatacgagagatagctcaggcc
gtagtcttagatgctgagatagcagatcgtgaacaagcagctgatgcagcaacgtcaggt
ggtggagatacgactgggggttcaatgcagcacatgcatttaacgcgtgatactacatcg
tccgcatcagctaaatcgcccagacgttcaacagcaagagcgtctcaggcttttgctgag
ggcaccatatctgctgtacaagcagcgctgcacaaatatcagttggctttacatgacatg
caagtgaaattccagaatgcaaatgaaaatctacgctccactaaaacacaattggacact
agcgaaggcacgaaagctttgttgaccacaaagatacatcagctaacggaaaaattggat
gccagtaattcaaaactatcggaattattgaaagaacgtgatagtttgcaaaaaaccttg
gacgagatacgggatcaaaagcagcagtctgatcaaggaaaagccgaaataaataatgct
tttgaaaacttgagtgtcgattttgaaaagttgcagtttaactatggcaaattgcaaaag
aaaattgatgctttggaagaggacaaaaaggcggtggaattggaaattcaaagaattttg
aaggataaaaatataactgaattgaatttaagagccgaagaagatcgcggtagtcgctta
agagaggaaactatatccttaagagaggaattaaatcgtgtcagtttaaatcgtgatcta
ctcgaacaacagcgtatagaatccgataatattatcaatttattggaaaaacaaaaggcc
gacttggaatatgatctagataaaatacttttggaaaaatgtgatattcaagaacgcttg
gagaagatctctaacaacagctcgtctactacggatgaactaaaaatcttacaacacaat
atacacgaagtacaggaagatcgaaaaaaaataacgcaacaattacaggatcaatcaaat
gaactggccgatgtccgcaaagagttaagtaatttggataaggtacgtttggagttggaa
accgacaatcttggtttcagtgagaaggtgaaatgtttgcaaatggaaaaggagaaaata
ttacaagatctggcatgtcttacaagagatcgcagtgatatacacaatcagttaacggcg
ctgtgtcgtaaaaaggagtctctaaatgaggaattaatgcgcacccgccagagattggaa
cagacaactgaaacgaataatcgtctgaatcgtaatctagaagagatggttaaagatgtc
gaagaaaagcaggttgttatcgatttacatgaaaaggaaactcatcgcttacaggaactt
ttggcagctttacgctcagaaaaagaatctcttgacgctgttctatttgataccaataca
aacttagaagccgtcgaagaaagaagagcccaaatagaaaaagaattacaagaagccttg
gttcgagaagaaacgttaaaaaatcatgtggctcgcttacaaaaagacttggagcagtgc
cagcgtagagctcaagaaaccaaaacacaactactcaatgctgctcgtgaagctgaaaat
gatttcaaccaaaagattgccaatctaaaatcagcagccgaagagactggtaaaaagcat
gccgacgaattactgcaattgcgtaatggtttagaaaaacgtatgcaacaagccttgcaa
gctctacaaaccgccaaggatgatgaaattgaaaagcagcaggaacgtttggatgctctg
caaactcatatggaaagtctaatacagcaacatgaagaagccctaattcgagcagagaat
gagaagcagcaagctttacttatagctcatcgtgacaaacaagctgttcaagagaaatta
gaagccatagcaagagaattgaagaatgaacaggatgccttggagcgcgccaaaagagag
cataatactcgggatgaaaagcaacgtagtgcaatagctcagctaaaggatgaaatagtt
gctatgagaacaaaagaagaagaacaaaaaattaaattggaggattgcatacgtaaacaa
gaaatacaaatgaatgcattgagagaggaaagagataatctcttaaggcttagcgatgaa
ctgaaaatggatattcgcctcaaagacgacagagtggaatcgattacgaatgaattacaa
gacaccttgagaaaagccaaagaaggcgagggttatatagaaagtctgcgcaaagacatg
actgatacaaggagacagttggcggacagcaacatcgaacgtgacaagtattccgacagc
aataaagaattgcgggatcacgttaagcgcgtagaaagttccaagcgagagcaggctaga
gcaatagaagaagctttacagaaaataagcaatttggaagagaacaaaaatacattggaa
aatgagcgtacccgtttgaccaccgttctcaaagagacagagaataatttatctaaaaca
agccaagaattaagtagcacaagaaatacattgcaaaagactcaagtagagtttgcccag
aaagatgaaggtggcaaagagttgcaaaataaactagcatctgagacagagctaaaggaa
agggctcaacaggaactgaaccaggtcaagaaacaattggccgatttggaggctaatctt
tgtgctacacgccaagaattgggtagagctagatgtcattccaaccaggaagaacatcgt
ttccacaaccgggaacaagaattagtggctcgcatagaagaatctcgcggtcgggagaaa
cgtttggaagatcagaaacataatttggaagtatgtttagccgatgctacacaacaaata
caagaactaaaggccaggctaggtggagcggaagggcgtatacgagctttggatgaacag
ttagcatgtgttgagctacataagcgtgaaatcgaacataaattaagttccgttattcac
actcttagacgtattgcaggcatacaaattgatggtagcgttaatctatctcatcgtctg
gttagtccatcacgtcgcttctctcccgtacgtagtgtatccggtggtgtggctcccagc
tgtcatgactttgaaacgcgcagtacttctcattgtcccgatggacctgccttagactgc
gaccccgatcttatacgcaaaggtgttagatgccttatgcatcaagtggcccaaattgag
cgggagaaagacgactacaaaatgcagctcttaacagccaagaaacaattgcaagatgct
ggcgaacagcaattaaagtgtgattccaaagtttcgaaacttcaacagatgataagacat
cttcagcaggaaaagagcaacctcgacacagagcgcagcatgaaagtatctgccataaat
gcattagaggacaaattccataaaaaacaagacgaatgccaacagttacgagagaaactg
gctcaatctgaaatgcaattaaactcatgcaccgaagagaattcacaaaacgaagatcgt
ttagagaagtgtagacaacatggcgctaaattggagaatgaaaagcgtcatttacaagag
gagttggctaagatcgaaggcagggcaacaaagttagatttacaaagagtggcaatggag
ggagatctcacgcgtttacaaatggctctgcaagagaaagactgcaacatacgccaggct
caagaacgtttagataatcaaggcagagccatggtacaattggaagacaggtgtgcctcg
cttaagacggccctagatcaaatgaaagagagactacaaagagccgctgttgtagaggct
gagctgagaggtgagttaaagactgctcataaagaattgacggatcaaggacatagcacc
caaacaaatgaggataaacttaagctgttacaaaaatctctacaaacggccgaaaatgaa
aaacgcatttttgctgagcgccttgaaaaagcacaatcatccattaatgaactcaggcgc
ggtcaacaggcccaattggacagtgctcaacgtttgcaagatcaagtcaacgacttggaa
gttcaacgatcagctttggaatctcaattacgcattgcaaaatggaatcaagaatccggc
gataaaaataatggtcccaacggacgcaatgaagaagacgagctgaatcgccagctaaaa
tcgtcacaaagagaaaaatctgagttacgcaccaaactgcaggtgctgcaggacaaggta
aaacaattggaaaatgaacgcaaaagtaaattttccggtgacagtgtctatgatagatct
gaaaaggcaacaacagctgctggtggtggtggtattggtccaaactcttctgcatcctat
tacgatggcaattacgactctaatcgcttagacacaaataatgctggcaaaaacgataat
tatcttaaaagctccggtgcagcaggtgttggtggaacttttaattgtggcttggatcat
gctgtcattgagcatgaaaatcgtgatttgcgtttgaaagtaagacgcttggaaactttg
ctagcggaaaaagaatcagaattggcccgttgtaaggcacgcatacatgatagtgccaaa
tgtatggatggcttagattctgaacgctatagaagtgctcaaatgcatgctgaaaagctg
ttagatgccagggaacaggctcacagacaacaagtgttgcgattggaaaatcagatctct
atgctacgcgaacagttagctcaggaggcaaaacgtcgtcaacagtacattttgcgcagc
tcgaaagctaaccgtgaaatgcagcacttacgaaatactttaggtgacagtctacgtcat
gtatctcagcatcctttggatccaaatcttttggaaagtgaatcaagaagattggataat
gctgtctccatgagtttgccaccatcaacctgcagagactatgaacgggactaa
DBGET
integrated database retrieval system
