Calliphora vicina (urban bluebottle blowfly): 135954442
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Entry
135954442 CDS
T10781
Symbol
U4-U6-60K
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135954442 (U4-U6-60K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135954442 (U4-U6-60K)
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135954442 (U4-U6-60K)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_1st
PRP4
CFAP251_N
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
ASA1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR41
WD40_like
Beta-prop_HPS5
Inhibitor_I53
Nha1_C
Motif
Other DBs
NCBI-GeneID:
135954442
NCBI-ProteinID:
XP_065360689
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All DBs
Position
3:complement(7454772..7456882)
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AA seq
532 aa
AA seq
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MSDDDVQYVKRQRTLYYGSLEDAERKRMLSGGTSNITAATTSSQLEDIESDEDYDEQKKQ
GTTVAPPPTAAALANKIDDDYFDLETEISKDKVALLEEFERKKRARQINVSTDDAEIKRN
LRQLNEPICYFGEGPAERRRRLRELLASLGENAIKQKLAEEEERKQLQKEQETTWYHEGP
ETLRIARLWIADYSLPRARERLEKAKEALEIPSATRAGRMVELQKRLQSLAPYSSQVGDT
RPLGGCAFNHDSSLLMTSSWSGLCKVWRVPDCKLEQTLRGHTSYVGGVAFRPGVSFEDKN
VVAMASGGHDGAVKLWGFDSEESIADITGHMPHRVSKLNFHPSGRFLATACYDASWRLWD
LEQKTEVLHQEGHAKAVHCLSFQSEGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGSIF
GADFSPNGYHIATGSQDNTCKIWDLRRRQSVYTIPAHVNLISDVKYQGDGGSFLVTCSYD
CTTKIWSNKTWQPLKTLQGHDGKVVSLDISPDSQYIATTSFDRTFKLWSPES
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacgatgtacaatatgttaagcggcaaagaactctttattatggttcacta
gaggacgccgagcgtaaacgtatgctgtcagggggtacgtcgaatattactgctgcaacg
acatcatcccaactggaggatatcgagtcagatgaagattatgatgaacagaaaaaacaa
ggaacaacagttgcacctccgcctactgccgccgccctagcaaataaaattgacgatgac
tacttcgatttggaaacagaaatatcaaaggataaagtagcgctactagaagaatttgag
cgcaagaagcgagctcgacaaattaacgtttctaccgatgatgccgaaatcaaacggaat
ttacgacagcttaatgagcccatttgttattttggcgagggacctgctgagcgcagaagg
cgtctcagagaattattagcatcgttgggggaaaatgctataaaacaaaaattggctgaa
gaagaagaaagaaagcaattgcaaaaagaacaggagacaacatggtaccacgagggacca
gaaacacttagaatagcacggctatggattgccgattattctttacccagagcgagggaa
cgtttagagaaagctaaggaggctcttgaaataccgagtgctaccagagctggtcgcatg
gtggaattgcaaaaacgcttacaatctttggctccatattccagtcaggtaggtgatacc
cggccactgggaggatgcgctttcaatcatgattcatctctcttgatgacatcgtcttgg
tcaggtttatgcaaagtttggcgggtacccgattgcaagttagaacagactctgcgtggc
catacgagttatgtgggaggagtagcttttcgtcccggagtatcgtttgaggacaaaaat
gtggtggctatggcttctggaggccatgatggtgccgttaagctatggggatttgattca
gaggaatcaattgcagacataacgggccatatgcctcatcgagtgtcgaaattaaatttt
catccatctggacgtttcctagccacagcatgttacgatgcatcgtggcgcttatgggac
ttggagcaaaagactgaagtacttcatcaggaaggtcatgcaaaggctgtacattgttta
agctttcaatcggaaggaagtgttatagttacaggcggcttggatgctttcggcagagtt
tgggacttacgaacaggtcgctgtattatgtttttggaaggacatttgggttctatattc
ggtgcggacttttcacccaatggctatcacattgcaaccggttcgcaagacaacacttgc
aaaatatgggatctgcgacgtcgtcaatcagtatacacaataccggctcatgtaaatctt
atttctgacgtcaagtaccaaggtgacggtggcagttttctcgttacatgttcttacgac
tgcactactaaaatatggtcaaacaaaacttggcagccgcttaaaactctgcagggtcac
gatggcaaagtggtttcattagatatatcaccagactcgcaatatatagctaccacatcc
ttcgatcgtacatttaagttatggtctcccgaaagttaa
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