Calliphora vicina (urban bluebottle blowfly): 135954825
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Entry
135954825 CDS
T10781
Symbol
Gem3
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135954825 (Gem3)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135954825 (Gem3)
Spliceosome [BR:
cvj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
135954825 (Gem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
SLFN-g3_helicase
AAA_22
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
135954825
NCBI-ProteinID:
XP_065361134
LinkDB
All DBs
Position
3:complement(48264642..48268210)
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AA seq
1000 aa
AA seq
DB search
MDTKGIAHKLDAKERTDDVRLKELAPFSKMLLSEPVRKGLHTAGFMYPTVIQATAIPVGK
SGMDLLVQSKSGTGKTLIFSTIVLEFYQSDLREPQSLIVAPTREIAVQIEEILNEIGKYC
AGFRAVCVIGGMDVAEDRKRLQGAKSVVGTPGRILHLIQNEVLNTSQISTLVIDEADKMY
TQTFRQDLQRIRKALPNRKQTIACSATFIDNLDKELAKIMKNPLLISTEERATLLVGIKQ
FVYELPEQKTSILEMQLKLEALRHIFGRVAFKQCLIFAGSQSRADSYRNYLEKDGWPCEL
ISGAQDQKTRLENFRKFREFKTRILMATDLMARGVDSEHVNLVINLELPVNVVTYLHRIG
RAGRFGSHGLAISFVSSEKDQRNFKKLITEVGTGMKVLKFPLKDQPEKNPRDLWNFGEFE
EDANYFGVYQSDIQKLLAPLASQDNITLTSSLSDNKENLTNNISSNQQSSIDTNTFLVNS
QDSALHVPNLSSEQLNAQQIMLSPSNNEDCIEDLPPLGTPPPPPNPSENLNTAGESHNSS
SHHLLTSNTIDDASSIAADSLRSSQQDISRYQSVLMQKSAIPTLVEFLVDRHSSQDSQTK
DCEPCTKIDLFDAYTKEVLNNNESFTEPAVTVDEPLMSSNKLAQLKSLLIDKPDEKSPTN
NVHDLYSDFANFQEDDISTSVSEDIDKQTFILSVATPSVQQDSFSELQNNSSDLYPATDE
TNISMGDKEPKHFPSPAHNQVTEFMPDLLAGQMQKNKPPQQHQKLQQKLSINKTAQIEIP
PYQSPPNSVSPLVNALQNNENNSSPTSESSSDSATSPQDEVLDNSGSDIERSGNTSGFDE
KTSTSGSSGIESSEHNNTEERPQQIPVYYTSSEDESYESDDEEEEEEEEGEDNDDGSEHY
FNTDEEAEEEDGDADDDDEELAECLENRMATDFTQIHTTTTTRNHSSNSSNTLTNPTTDS
LNLAYHSAYSRWVDLYWNQMTLVQDYVKFFNFTRQQQQNE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaaaggcattgctcacaaattggatgctaaagaaagaaccgatgatgtgcgt
ctaaaagaattggcgccattcagtaaaatgctactttcggagccggtgcgtaaaggttta
catacagctggctttatgtatcccactgtaatacaagccaccgctataccagtgggtaaa
tcaggaatggacttattagtgcaatctaaatcgggcaccggaaaaactttgattttttct
acgattgtcttggagttctatcaaagcgatttgcgtgagccacagtcgttgattgtggca
ccaacacgtgaaattgcagtgcaaattgaagaaattcttaatgaaattggtaaatattgt
gcaggatttcgcgctgtttgtgttattggtggaatggatgtggcagaggatcgtaaacgt
ttgcagggggcaaaatctgtggttggcactccgggaagaattttacatttaatacaaaat
gaagttttaaatacttcacaaatatccacgttagttatagacgaggctgataaaatgtat
acacaaacatttcgccaagatttacagagaatacgcaaagctttgccaaatcgcaaacag
accatagcctgtagtgccacattcattgataatttggataaggaattggcaaagattatg
aaaaatcctttgctgatatccacagaggaacgtgcaacactcttggtgggcattaaacaa
tttgtctatgaattgcccgaacagaaaacaagtattttagaaatgcaattgaaattggag
gccttaagacatatatttggcagagtagcttttaaacagtgtttaatatttgctggctca
caatcacgtgctgattcgtatcgcaattatttggaaaaggatggctggccttgtgaactg
atatctggggctcaggatcaaaaaacacgtttggagaatttccgtaaatttcgtgaattt
aaaacacgcatactgatggccaccgatttaatggcacgtggtgtggattccgaacatgta
aatttggttattaatcttgagctaccagttaatgtagtaacttacctgcatagaataggc
agagcaggacgttttggttctcatggtttagccattagttttgtatcgtcagaaaaagac
caaaggaattttaaaaaacttataaccgaagttggtactggtatgaaggtgttgaagttt
cctttgaaagatcaaccagaaaagaacccaagagatttatggaattttggagaatttgaa
gaagatgccaactactttggtgtgtatcaaagtgatattcagaagttattggctccccta
gcctcacaagacaacattacactaacttcttcgctgtcggataataaggaaaatcttaca
aataatatttcatccaaccaacaatcgtccatcgacaccaatacttttctagtcaattct
caagatagcgctttgcacgtgccaaatttgtccagcgaacaacttaatgctcaacaaatc
atgttatctccctcaaataatgaagactgtattgaagatttaccacccttaggtacacca
ccaccaccgccaaacccctccgaaaatcttaacacagctggagaatctcacaacagctcc
tcacaccatctgttaacttcgaatactattgatgatgccagcagcattgcggctgatagt
ttgcgtagcagtcaacaggatatttcacgttatcaatcggtattaatgcaaaaatcagcc
ataccaacactggtggaatttctggtcgatcgtcattcttcacaggactcacagacaaag
gattgtgaaccttgcactaaaattgacttatttgatgcttacaccaaggaggttttaaat
aacaatgaatctttcacagagcctgcagtaaccgtggatgaaccattaatgtcctccaac
aaattagcacaattgaaatctttgctcatcgataaacctgatgaaaaatcacccactaac
aatgtacatgatctgtattccgattttgccaacttccaagaagatgacatttcgacctcg
gtatctgaagatattgataaacaaacctttatactgtccgtagctacgccatctgtacaa
caagattctttttcagaattacaaaacaattcttcagatttatatccggccacagatgaa
acaaacataagtatgggagataaggaaccaaaacattttccatcgccagctcacaatcaa
gtgacagaatttatgccagacctcttggctgggcagatgcaaaaaaataaaccgccacag
cagcatcagaaactacagcaaaagttatccattaataaaactgctcaaattgaaatacca
ccttatcagtcgccacccaattccgtctcacctttagtgaatgctctgcaaaataatgaa
aacaattcatcaccaactagtgaaagttcttcagattctgccacatcgcctcaagatgaa
gttttggacaactctggctctgatatagagcgtagtggcaatacgagtggttttgatgaa
aaaacctcaacatctggttcatcgggcatagaatcttcagaacacaataatacagaagaa
aggcctcaacaaattcctgtgtactatacatcaagtgaagatgaatcgtatgaaagcgat
gacgaagaggaagaggaggaagaagagggggaagataatgatgatggaagtgaacattat
tttaatacagatgaagaagctgaagaagaagatggagatgctgatgatgatgacgaggag
ttagctgaatgtcttgaaaaccgcatggccacagatttcactcaaattcatactacaact
accactcgtaaccacagtagcaattcatcaaatactttaacaaaccccacaacagattct
ctcaatttagcctatcattcggcttattctcgatgggtcgatttgtattggaatcaaatg
accctggtacaagattatgttaagttttttaatttcactagacaacagcaacaaaatgaa
tag
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