Calliphora vicina (urban bluebottle blowfly): 135954838
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Entry
135954838 CDS
T10781
Symbol
Cpsf5
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135954838 (Cpsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135954838 (Cpsf5)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
135954838 (Cpsf5)
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
135954838
NCBI-ProteinID:
XP_065361150
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Position
3:67907471..67914899
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AA seq
231 aa
AA seq
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MATQVTNKSGTGWPRRSSQGQMDNGTQKFNANQSLTINRTINLYPLTNYTFGTKEPLFEK
DPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGED
EVEGLKRLLTETLGRQDGVKQEWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFL
VQLHEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFNFIYM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcaagtaacaaacaaatctggaactggctggccacgccgcagcagccaaggg
caaatggataatggtacacagaaatttaatgccaaccaatcgttgacgataaataggaca
ataaatttatatccacttacaaattacaccttcggaactaaagaaccattatttgaaaaa
gatccttcagtaccttcccgtttccagcgcatgcgtgaagaatttgatcgtatcggtatg
agacgttccgtcgaaggtgttcttttagtgcatgagcacggtttgccacatgttttactg
ctacaacttggcaccacatttttcaaactacctggaggtgaacttaatgctggcgaagat
gaagttgagggactcaaacgtctactaactgaaactttaggccgtcaagatggtgttaag
caagagtggatcgttgaagatactattggaaattggtggcggccgaactttgaaccaccg
caatatccctacataccaccgcatataacaaaacctaaggaacacaaacgtttgttttta
gtacaactacatgaaaaggctttgtttgctgtaccgaaaaattacaaactggtagcggcg
cctctgtttgaactctatgataattcacagggatatggtccaataatttcttcgcttcca
caagcgttatgcaggtttaacttcatctatatgtga
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