Calliphora vicina (urban bluebottle blowfly): 135955058
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Entry
135955058 CDS
T10781
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135955058 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
135955058 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135955058 (thoc6)
03041 Spliceosome [BR:
cvj03041
]
135955058 (thoc6)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135955058 (thoc6)
Spliceosome [BR:
cvj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135955058 (thoc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_C
SH3_CYT4
WD40_Gbeta
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135955058
NCBI-ProteinID:
XP_065361422
LinkDB
All DBs
Position
3:complement(13121879..13123094)
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AA seq
348 aa
AA seq
DB search
MSALTSLRDPQFDYKIKRFYNCVLAQTISSSGKFLFAGNRDGDIFVQKLNDLQNSEEPHE
AIKIYAQGDEVEINCLCFHRDFLIVGSIGVVYGLKWLEEKGELVNKRSWEIKIPIEADAI
EVPDVNCMWLRPETDCLFVGCGDNVMYEISLEDGRIVRDFKGHEDYIHGVCGFGPNKLYS
ASEDGSVRFWSCNEKESVGIIEPYKKESLNRPEMGKWVGALAVNDDWLVCGGGPKLSLWH
LRTMECTNEFPYPGKVHVCDFVEDMIFVGGEHTNAQFYAMNGKLRADIKTENTAVYSAVW
QVEPQRFMSIAGFSNWLSILNDFRFLDSKIELYVPKEGDEISDEKKYN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacttacttccctacgtgatccgcaattcgattataaaataaaaagattttat
aattgtgttctagcccaaacgatatcgagctccggcaagtttttgtttgccggcaataga
gatggcgacattttcgtgcaaaaattaaatgatctacaaaattcagaagaacctcatgaa
gccataaaaatctatgcgcaaggtgatgaagtggaaataaattgtttgtgtttccatcgt
gactttttgatagtgggttccattggtgttgtgtatggtctgaagtggttggaggaaaag
ggtgaactggttaataagagatcttgggaaattaaaatacccattgaggccgatgccatc
gaggtgcccgatgttaattgcatgtggctgagaccagaaaccgactgtttgtttgtgggc
tgtggtgacaatgttatgtatgaaattagtttggaagatggccgcatagtaagagatttt
aaaggccatgaggattatatacatggtgtttgtggatttgggccaaacaaactgtactcc
gcctccgaagatggctcagtgcgcttttggtcatgcaatgaaaaagaaagtgttggcatt
atagaaccctataaaaaggaaagtttaaatcgtcccgaaatgggtaaatgggtgggtgcc
ctagcagttaacgacgattggctggtgtgtggtggtggccccaaattatcactttggcat
ttacgcactatggaatgtactaacgaatttccctatcccggcaaagtgcatgtatgcgat
tttgttgaagatatgatttttgtgggcggagagcatacaaatgctcaattctatgccatg
aatggtaaattaagagctgacataaagacggaaaatacagcagtgtattcggctgtttgg
caagtggaaccacaacgttttatgtccattgccggtttcagtaattggctgtctatactt
aatgattttcgatttttggatagtaaaattgagctgtacgttcctaaagaaggtgacgag
atcagtgatgaaaagaaatataattaa
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