Calliphora vicina (urban bluebottle blowfly): 135955087
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Entry
135955087 CDS
T10781
Symbol
Setx
Name
(RefSeq) uncharacterized protein Setx
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvj03021
]
135955087 (Setx)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135955087 (Setx)
5.6.2.5 RNA 5'-3' helicase
135955087 (Setx)
Transcription machinery [BR:
cvj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135955087 (Setx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
Viral_helicase1
Yop-YscD_cpl
AAA_19
AAA_30
AAA_7
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135955087
NCBI-ProteinID:
XP_065361454
LinkDB
All DBs
Position
3:complement(39203088..39214318)
Genome browser
AA seq
1938 aa
AA seq
DB search
MEERRYSSWMLERIAIGDTVRLRLGASTLGRHSSSVIRIMDSGFVSRHHAVIEVTDDNTS
VSITDVSSNGIYVNDVRYERQTVQLNNGDRIGIGVTTGDYDNAEDVLKLPIYELKLSPIR
PLRIPNANRPPPVPNANRPAPAPISKPTIPEPPSGSNGNKSTESNSKKAADNNAIEDDMK
PCCSKTIKVEKLITNDEIFEISDDDDDERDVVQKSKPDQMDVITQPKAKEPEEKSKEKQH
ELHTDATKQASNPDQMNVLTQLKQNEPEKKSNGKQQELHTDVLKKIDMVIKNEPIDDKDY
INPSQKSQEKTCNEEMLPIAKDAKESLTNAINPTTESINDNNNKALDINKAKPQGCDQQA
ATEGDLNNKEKQILLHVPIISDVKKEHLRSVSADIQNIFGDIDGHDEIQKKIKEINPLVY
KEIHVSKNLKPLDGDDQLQMLNNGDYIVLTDDEDLEVDDLGTIVQNTTENKENDTTTTGT
ITNMDTAKSPNVFEVSLDSSKEEIIMVGEVQQNNEVAKKPDVTVLNDNIDLDEYTKYAPN
SDDEDIEDLMFSQVIMNDMKAELQDEIDNKENLPLTDANIDHHAPVVSNTDKVLAIKKEP
GLEVFSVVPKELDNSCWIVSDDEDYDEELETKVNDWSNKIFSQSFNQLSQNMSQVYDIDE
EFNNDSNDDDEGNEEDDLYLLEDDIEGIANIYNNNNESEVDIKLKNLNDELKKAKEQAFD
ALSTKPAKESIEKLDKTKNNVVDEQKQEKMENVLTNEMKNKEIETSVKEKSPVNEINKSS
TFTDSPIVRIRRLSKTTPVIQSPSSSEDEFDLDNQKLTNGLKSADADKSTARLIPPVIEA
PSLPKHKGKLRGVSAEIHKKTATNFKSASVQKTFSSIKEKIHHERYTKDMKRKWLEKPSI
AKKRDKEHTKYIKECRKDKLKELAERKKSPTKENIKRKMSTEDHDHKAKVAKVKVTTHNR
GAFLVNNDPTPLPPPPVHSHKPEPIGQFKIPKVMKRNDEPKKSNPIEGQNKKDPLSRSLS
IDGFETFSQQIAKPDVILLKRQNSDPKKCDKPATNNNIHKPPPPLRRHSTTEAPKRPIQP
STKRRATPPPPSSPICKEAIAARAVRTTNKITFASMEKNIVESEENKRKLSVLSTISNPL
TPHNTVAHPSNLKSSSTPSATKKTVRFNDTPVIHYIERVTGACKKINYKDIMPMSTYKDR
RHSIRTTFPIVDKTDDIITNILCWSNEWLTKRNAAADAASDVIYPMPTHFSSFEQYKSII
FPLMKLEFVSTLEHEYTETQNVKKFKVSLEYATHNKDRIMLVTKFLNNQTKELTDSSNFD
LVLLETDQRGPQIFAYVVGNRKGAGIYITIVYEIIAKNFTLEYFKAIKEFEVRPVIDRVR
VHFGSFNAIYQLESTPLFQKIINPLELLKCRPPPKKKVSYRGFDPLNDKQKQVLLNTYTK
IIDETTPNITLIQGPPGTGKSCVISNLALQTLYGEEVRYLDKKILICAQSNAAVDVIASK
LYDISMRMRPEKRFRIIRYGMLNKMNENVLPIALQKVVEHDQLKKLQAKNKNIQLENKEN
LKNQILQFEAQVMEMSARNIKGTVEEDLLIEKKRQLQLMRNILNESMRPEDERSLYTWYL
SNANIICATLSSCVNLTQYINFFDICIIDEATQCKEPFTLLPLKFGINSLVLVGDTQQLP
ATVLSKKANELGLGTSMFTRIQHCLDNIPCTSVKGSNVAVTTPNNIICSLQTQYRMHPEI
CRWPNQYFYRNELINGKTILDFTKSPLVPFCILNMAYTQHNFSSNGKIENNLEADFVAKL
LKALDGFIPNKYNSYGVITPYAHHRATLESSIRSMGLTNIMVNTIDSYQGLEKDVIVISN
ARTRGIGFLSNPQRLNVALTRSKKCLILCGNFRNLETVPAWRCLLESARERKLYHEISEN
CIADIQTNVIEKIKLKNQ
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagacgatattcgtcatggatgctggaaaggattgcaattggagacaccgtt
cgtttgcgcttaggtgctagtacactgggtcgtcattcatcaagtgttatacgtataatg
gattcagggtttgtgtcccgacatcatgcggtaattgaagtcacggatgataatacaagt
gtgtcaattacggatgtgtccagtaatggcatttatgtcaacgacgtacgatatgaaaga
caaactgtacaactaaataatggtgatcgcattggtatcggtgtaactactggagactat
gacaatgctgaagatgttctaaagctaccaatatatgaattaaagttgtcaccaataaga
ccactacgaataccaaatgcaaacaggccacctccagtaccaaatgcaaacaggccagca
cccgcaccaatttctaagccaacaataccagagccgccatctggaagtaatggtaataaa
agtactgaaagcaatagtaaaaaagcggctgacaataatgcaattgaagatgatatgaaa
ccatgttgcagtaaaaccataaaggtggaaaaattaatcactaacgatgagattttcgaa
ataagtgacgacgatgatgatgaacgtgatgtggtgcaaaaatctaaacccgatcaaatg
gatgtcataacacagccaaaagcaaaagaaccagaggaaaaatccaaagaaaaacaacat
gaattgcatacagatgccacaaaacaagcatctaaccctgatcagatgaatgtattaaca
cagcttaaacaaaatgagccagagaaaaagtccaatgggaaacaacaggaattgcataca
gatgttttaaagaaaatagatatggtgatcaaaaatgaacctatcgatgacaaagactac
ataaatccttcgcagaaaagtcaagagaaaacttgcaatgaagaaatgttgcctatagct
aaggatgctaaggaatctttaacaaatgccattaatcccacaacagaatccattaatgac
aataataataaggcactagatataaataaagctaaaccacaaggctgtgaccaacaagct
gcaactgagggtgacttaaacaataaagaaaaacaaatattattgcatgttccaataatt
tcggatgtgaaaaaggaacacttacgttctgtctcagccgatatacaaaatatattcgga
gacatagacggccacgatgaaatacaaaagaaaattaaagaaataaatcccttagtttac
aaagaaattcatgtatccaaaaacttaaaacctttagatggcgatgaccaattacaaatg
ctaaataatggcgattatatagtattaactgatgacgaagatctggaggtggatgatttg
ggtaccattgttcagaatactacggaaaacaaagaaaatgatactaccactactggcact
attactaacatggatacagcaaaaagtcccaatgtgtttgaggtttcattggatagctct
aaagaagaaataatcatggtgggcgaagtgcaacaaaataatgaagtggccaagaaaccg
gatgttactgtactcaatgataatatagatctggatgaatataccaaatatgctccaaat
agtgatgacgaagatatagaagatcttatgttttcccaggttatcatgaatgacatgaaa
gccgagctccaagatgaaatagataacaaagaaaacttaccactaaccgatgcaaatatt
gaccatcatgcaccagttgtctccaatacggacaaagtattggccatcaaaaaggaacct
ggcttagaagtgttctctgtcgttcctaaagaactggacaactcttgctggattgtaagc
gatgacgaagattacgatgaagaattggaaacaaaagttaacgattggtcaaataaaata
ttctcgcagagctttaatcaactgtcacaaaatatgtctcaagtctatgacatagatgaa
gaattcaataatgattctaatgatgacgacgaaggtaatgaggaagatgacttgtatttg
ctggaggatgatattgagggcatagcaaatatctacaataataacaatgagagcgaagtg
gatataaagttaaaaaatctcaatgatgaattgaaaaaagctaaagagcaggcttttgat
gctttaagcactaaaccagctaaggaaagcatagaaaagttggacaaaactaaaaataac
gttgtggatgaacaaaaacaggagaaaatggaaaatgttttgacaaatgaaatgaaaaat
aaagaaattgaaacatctgttaaagaaaaaagtccagttaatgaaattaataagtccagc
acctttacggattctcccatagtacgcataagacgtttaagcaaaacaacccctgttata
caatctccctcctcttcagaagacgaatttgatttagataatcagaaactaaccaatggc
ctaaaaagcgctgatgcagacaaatccactgcaagactaattccgcccgttatagaggca
ccctcattacctaaacacaaaggtaaactcagaggagtttcagctgaaatacacaaaaag
accgcaactaactttaaatctgcgtctgtgcagaaaacattttcgtctataaaagaaaaa
atccaccatgaacgctatactaaagacatgaaaagaaagtggcttgaaaaacctagcatt
gctaagaaacgcgataaagaacatacaaaatacattaaggaatgccgcaaggataaactc
aaagaattagctgaacgcaaaaagagtcccaccaaagaaaacataaaacgtaaaatgtcc
acagaagatcatgatcacaaagcaaaagttgctaaagtcaaagtaaccactcacaatagg
ggagcttttctagtaaataatgacccaacaccactgccgccaccaccagtgcatagccac
aaacccgaaccaataggtcaatttaagataccaaaagttatgaagagaaatgatgaaccc
aaaaaatccaatcctattgaaggacaaaacaaaaaggatcctctatcacgttcgcttagc
atagatggctttgagacattttcacaacaaattgctaaacccgatgtgatattgctcaaa
cggcaaaactcagatccaaaaaaatgcgataaacctgctacaaacaataatatccataaa
ccaccaccacctttaagaaggcattctacaactgaggctcccaaacgtccaatacaacca
agtactaagcgtagagctactccgccaccaccttccagtcccatttgcaaagaggcaata
gctgcgcgagctgtgaggacgacaaataagataacatttgcctccatggaaaagaacata
gtagaaagtgaagaaaataaacgtaaattaagtgttttgagcaccatcagcaatccattg
acaccacacaatactgtggcacatccttcaaatttgaaaagttcctcaacaccaagtgct
acaaagaaaactgtacgctttaatgatacgcccgttatacactatatagaacgtgttacg
ggcgcctgtaaaaagatcaattacaaagatattatgcccatgagcacatacaaagatcgt
cgtcattcaattagaaccacatttcccattgtcgataaaacagatgacatcattacgaac
attctttgctggagcaatgagtggctgacaaaacgtaatgctgctgcagatgctgccagt
gatgtcatctatccaatgcccacacatttcagttcatttgaacaatataaaagcattata
tttcctctaatgaaacttgaatttgttagtacactggaacatgaatacactgaaacacaa
aatgttaaaaaattcaaagtatctctagagtatgccacccataacaaggatcgcataatg
ttggtaacaaaatttttgaataatcaaactaaggagcttaccgatagtagtaactttgat
ttagtacttttggaaacagatcaaagaggaccacaaatatttgcctatgttgtaggcaat
cgtaaaggggcaggtatctacataacgattgtttacgagattatagcaaaaaatttcact
ctcgaatattttaaagccattaaagaattcgaagtacgacctgttattgatagagtgcgt
gtacactttggctcctttaatgccatctatcaattggagtcgactcctctgttccaaaaa
attataaatcctttggaattactgaaatgccggccacctcccaaaaagaaagtctcatat
cgaggttttgatccgttgaatgacaaacaaaaacaggttttgctaaatacctacacaaaa
attatcgatgaaactacaccgaacataactttaatacaaggccctcccggtacaggtaaa
agttgtgtcatatccaatctagccctacaaacgctatacggtgaggaagtacgttatttg
gataagaaaattctaatatgtgcccaaagtaatgcagccgtagatgttatagccagcaaa
ctgtatgatattagcatgagaatgcgtccggaaaagagatttcgtattatacgttatggc
atgctaaacaaaatgaatgagaatgtcttgcccatcgctttacagaaagttgtagaacat
gatcagcttaaaaagttgcaagctaaaaataaaaatatacaattagaaaataaagagaat
cttaagaatcaaatattacaatttgaggctcaagtgatggagatgtctgctcgcaatatc
aagggcactgtggaggaggatttgctgatagagaagaaacgtcaattgcaattgatgcgc
aatatattgaatgaaagtatgcggccagaagatgaacgcagtttatacacttggtatttg
agtaatgcaaatattatttgtgccactctatcaagttgtgttaatttgacgcaatacatt
aatttctttgatatttgcataattgacgaagcaacacaatgtaaagaaccctttacatta
ttgccattgaaatttggcattaactcattagtattagtaggggatacccaacaattacca
gctaccgtattatcaaagaaagccaacgaactaggtctaggtacctcaatgtttacacgc
atccaacactgtttggataatataccctgtacaagtgttaagggctctaatgtggccgtg
acaacacccaataatattatttgtagtttacaaactcagtatcgtatgcatccagaaatt
tgtcgttggccaaatcaatatttctatcgaaatgaattgattaatggcaaaacgatctta
gactttaccaaatcaccgcttgtgcccttttgcatattgaatatggcatatacacagcat
aacttttccagcaatggcaaaatcgaaaataatttagaggcagattttgtggccaaattg
ttaaaggccttagatggtttcatacccaataaatataatagctatggtgttataacaccc
tatgcccatcatcgtgctacattggaatcgtcaataagatctatgggcttaacgaacata
atggtgaataccattgattcgtatcagggacttgaaaaagatgttattgttatatcgaat
gcccgtactcgtggtattgggtttctctctaatccccaacgtttaaatgtggccttgacc
cgctcaaaaaaatgtcttatattgtgtggaaactttaggaatttagagactgtacctgct
tggcgttgcctgttagaaagtgctcgcgaacgtaaattatatcacgaaatcagcgaaaat
tgtatagcagatatacaaacaaatgtaattgaaaaaattaagttaaaaaatcaatga
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integrated database retrieval system
