Calliphora vicina (urban bluebottle blowfly): 135955286
Help
Entry
135955286 CDS
T10781
Symbol
Prp6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135955286 (Prp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135955286 (Prp6)
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
135955286 (Prp6)
Complex C
U5 SnRNP specific factors
135955286 (Prp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
Suf
TPR_2
TPR_15
FAT
ARM_TT21_N
TPR_9
ARM_TT21_C
Wzy_C_2
TPR_12
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
135955286
NCBI-ProteinID:
XP_065361701
LinkDB
All DBs
Position
3:127641873..127645506
Genome browser
AA seq
931 aa
AA seq
DB search
MSNVTAAVIANRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPP
AAKRKKKDEEEEEDEDLNDSNYDEFSGYSGSLFSKDPYDKDDEEADAIYDSIDKRMDEKR
KEYRDRRLREDLERYRQERPKIQQQFSDLKRSLSNVTAEEWSNIPEVGDSRNRKQRNPRA
EKFTPLPDSVLSRNLGGESSSTIDPSSGLSSMVPGVATPGMLTPTGDLDLRKIGQARNTL
MNVKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPP
AWIASARLEEVTGKVQMARNLIMRGCEINPQSEDLWLEAARLQPTDTAKAVIAQAARHIP
TSVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELENPDDARILLSRAVECC
NTSVELWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIIDRS
LTSLTANGVEINREHWFQEAIEAEKSGAVHCCQIIIKAVIGVSVEEEDRKQTWMDDADFC
AKENAFECARAVYAHALQIFPSKKSIWLRAAYFEKNHGSRESLEALLQRAVAHCPKSEVL
WLMGAKSKWLAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARG
SAPTPRVMMKSARLEWALDRLDEASKLLDEAVEVFPDFPKLWMMKGQIEEQQRRLEEAAI
TYNTGIKKCPTSIPLWLLSACLEERKGVLTKARSILERGRLRNPKTPTLWLEAIRVELRA
GLKEIASTMMARALQECPNSGELWAEAIFMESKPQRKTKSVDALKKCEHDPHVLLAVSKL
FWSEHKFTKCRDWFNRTVKIDPDLGDAWAYFYKFELLHGAETQQHEVLERCIASEPKHGE
AWCSVSKHIKNWCFKTPEILKAVVKEISIPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgtaacagcagcggttatagctaatcgcaataaaaaacactttttgggtgta
ccagctcccctgggctatgtggccggtgtaggtcgtggtgctacaggtttcacaacacgt
tctgatattggtccggctcgagatgcaaatgatgtttcagatgatcgtcatgcaccaccc
gccgccaaacgcaagaaaaaagacgaagaagaagaggaggatgaggatttgaatgattct
aattatgatgaattcagtggttatagtggttctttgttttccaaagatccctatgataag
gatgatgaggaggcggatgctatttatgattcgatagataagcgtatggatgaaaagagg
aaggagtacagagatagacgattaagggaagatttggagagatatcggcaggaaagaccc
aaaattcaacaacagttttctgacttaaaacgttctttgtccaatgtcaccgccgaagag
tggtccaatattcccgaagtaggagacagtcgtaataggaaacagcgtaatccccgggcc
gaaaaattcactcccctaccagacagtgtattgtcccgaaatctaggaggagaatcctct
tccaccattgatccctcctcgggtttgtcttctatggtgcctggagtggcaacaccagga
atgttaactccgaccggagatttggatttgcgtaaaattggtcaggctcgtaatacacta
atgaatgtaaaactatcacaagtttctgattcggtaacgggtcagacagtggtagatccc
aagggttatctcaccgatttgcaaagtatgattcccacttatggtggagacatcaatgat
attaaaaaggctagactgttgctgaagagtgtcagagaaacaaatcccaatcatccgccc
gcctggatagcctcggctcgtttggaggaagttaccggtaaagtgcaaatggctcgtaat
ttgattatgcgcggctgtgaaataaatccccaatcggaagatttatggctggaggcggct
cgcttgcagcccacagataccgctaaagcggtaatagcccaggcagctcgtcatataccc
acttcggtgcgtatttggataaaggctgctgatttggaaacagaaactaaagccaaaagg
agagtgtatcgcaaagctttggaacatataccaaattctgttagattatggaaggctgct
gtggaattggaaaatcctgatgatgccagaattttactatccagagctgtggagtgttgc
aacacgagtgttgaattatggctggctttggcccgtctggagacttatgaaaatgcccgt
aaagtgcttaacaaggcccgtgaaaatatacccacagatagacagatttggaccactgca
gccaagctggaagaggccaatggcaatatacacatggtggaaaagattatagatcgttct
ctcacctctctaactgccaatggagtggaaatcaatcgagaacattggttccaagaggcc
attgaggcagaaaaatcgggtgccgtacattgctgtcagatcattataaaggctgtcata
ggcgtaagtgtggaggaagaagatcgcaaacaaacttggatggatgatgctgatttttgt
gccaaagaaaacgcttttgaatgtgccagagctgtgtatgcccatgctttgcagatattc
ccctctaagaagagcatttggctgagagctgcctactttgaaaagaatcatggctctaga
gagtctttggaggctttgctacaacgcgccgtggctcattgtcccaaatctgaggtattg
tggcttatgggtgccaaatctaagtggttggctggtgatgtaccagccgctagagggatt
ctctctttggctttccaggccaatcccaactccgaagatatttggttggcggccgttaaa
ttggagtccgaaaattcagaatacgaacgtgccagacgtttattggccaaggccagaggt
tcggctcctacacccagagtcatgatgaaatcggctcgtttggaatgggctttagatcgt
ttggatgaggcttctaaattattagatgaggcagtggaagtttttcccgattttcccaaa
ttatggatgatgaagggccaaatagaggaacaacaaagacgtttggaggaagctgccatc
acctataatacgggcatcaagaagtgtccaacttctatacccttgtggctgctttcggcc
tgcttagaagaacgcaagggtgtcttaaccaaggcccgttctattttggaaagaggacgt
ttgcgtaatcccaaaactcccactttatggctagaagccatacgtgtagaactgagagct
ggactaaaagaaatagcaagcactatgatggctcgtgccttgcaggaatgccccaattcg
ggtgaactgtgggctgaggcgattttcatggaatctaagcctcaaagaaaaaccaaatcg
gtagatgctttaaagaagtgtgaacatgatcctcatgtgttattggccgtttccaaactc
ttttggtcggaacataaattcaccaagtgccgggattggtttaatcgcacggttaaaatc
gatcctgatttgggtgatgcctgggcctatttctataaattcgaattgctgcatggcgct
gaaacccaacagcatgaggtattggaacgttgtatagcctccgaacccaaacatggtgaa
gcctggtgtagtgttagtaaacatatcaaaaattggtgttttaaaacaccagagatacta
aaggccgtggttaaggagatttctatacccatttaa
DBGET
integrated database retrieval system
