Entry |
|
Symbol |
CycT
|
Name |
(RefSeq) cyclin-T isoform X1
|
KO |
|
Organism |
cvj Calliphora vicina (urban bluebottle blowfly)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cvj00001]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135955820 (CycT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cvj03021]
135955820 (CycT)
Transcription machinery [BR:cvj03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
135955820 (CycT)
Brd4/P-TEFb complex
135955820 (CycT)
7SK RNP complex
135955820 (CycT)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:complement(218855..238999)
|
AA seq |
1263 aa
MSGIPSPSLARINGGSDRDKDSMWYFSSDDLANSPSRKAGITPDQELSYRQMTAYLIQEM
GQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNGIAAASLFLAAKVEEQPRKLEHVIKAA
NKCLNQPTTSTTDTYYLEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVKTCQLVKACKDL
AQTSYFLASNSLHLTSMCLQYKPSVVACFCIYLACKWSRWEIPQSTEGKHWFHYVDETVT
MDLLKKLTDEFIAIYEKSPARLKSKLNSIKALAQGAGNRQGQVKDKKADQDWKVSDMINM
KMYHPAETGVNTGSQSQSSSSLYSSQGSAGGESMSQQQSGSISQPMLPPPPHQPQQMRKP
DLHSSSQHRSHHSSSSSSSSHHPSKIGYSPGDVPDHKLSSGHSKQPQQQQQPQPYGGSNM
VSNRPPREHTSSMMAPSSNKSSSSSSRSSMSNNLPGQPIRQSSSQGHHPMEGNYHKPRER
NMAVPPPSSGHNMPPHGIPHKLAQKQDGIRSMSSKDHSGRLAADQANKQSNSNKMFPSSV
SSQYGGNNLQMPPGSNSNSQLSSKLDTMHDITRNLMHTSRGGYNNPPPQTQPSANGPAAP
LLNFHQQQQQGSRHSSSNISNSNTSSSLKHEQSKQQISVHMQQQTQTAAHHHKQPQPLPT
DQSYGSLSGAHDLQQQPHAASLISNNYSKIEPLQHSEEPSHNVNQYNQQAQNHAAKAANS
LFSPEWSDKLQGQQQEPHMSQQVLPLPVQGSGLNSYMNSSCNLTQNPDAYAASGYKIPSS
SISSKESSPPKIKGERDTPSKKDKNRSNSSNQDNGRSAVGHASAQQQILKTTIPKKLDSS
LSSSLTGLNELAGTSNMGSVGGIKRPNETVTVKQDDDLLMRDSKIRKIDPPAGNDIGKLQ
VVNGIETNPDLVRNLLKESLCSTPSIVTPSLQPPAELFEPSATTSSTNQHNTSITSISTT
VLSGNSDVSAMETDDHGTSGSKSEKKKKKDKHKHKEKDKSKDREERKKHKKDKDRHKDKE
RDRDHNDNGNSSAAGSAEHVKIKISKEKLEAGGEPIGFKIKIPKDRIMGDLNTGSSGQTN
IDSSASHGPPVLKIKISKDKLESYSSGSTDLGAGLAATTHPSYGHNPSVAYTSYGAAGSH
SNLSTTTHSSSSSSKKKDRDREKDRERDKDKKRSHESSSSKSNGSGVGGGSSGFMTAGVV
GSNATNGSIAGQHHSNSISGSSTTQKAQYSSKLQALRKRLLNFFPGGRFQSKVKTKKTLS
KRF |
NT seq |
3792 nt +upstreamnt +downstreamnt
atgagtggcataccaagtccatcacttgctcgcattaatggcggtagcgatagggataag
gattccatgtggtatttttcatccgatgatttggccaattcgcccagtcgtaaagctggc
attactccagatcaagaactgtcttaccgtcagatgactgcgtatcttatacaggaaatg
ggtcaaagacttcaagtctcccagttatgcattaacactgccattgtgtacatgcatcgt
ttttatgcatttcattcgttcacacatttccatcgtaacggaattgcagcggccagtctg
tttttggccgctaaggtcgaagagcaaccgcgcaagttggaacacgttataaaggcagca
aataagtgcctcaatcagccgactacctctactacagatacctactatcttgagcaggcc
caagatttggtattcaacgagaatgttttactccaaacattgggcttcgacgtagccatt
gatcatccacacactcatgttgtgaaaacatgtcaattggtgaaggcttgcaaggatttg
gcgcaaacttcgtactttttggcctccaacagtttgcatttgacttcaatgtgcctgcag
tacaaaccctcggttgtagcatgtttttgcatttatttggcttgcaaatggtcacgttgg
gagattccccaatccactgagggaaagcactggttccattatgtggatgagacggtgacg
atggatttactgaagaaattaaccgatgaatttattgccatttacgaaaaaagtccagct
cgccttaaatcgaaattgaattcaattaaggctctggctcaaggagccggtaatcgccag
ggacaagttaaagataaaaaagccgatcaagattggaaggtatcggatatgattaatatg
aaaatgtatcatccagccgagacaggggtgaatactggcagtcagtcccaatcatcttca
tctctgtactcgagtcaaggatcggcgggaggcgaatcaatgtcgcaacaacaaagtgga
agtatatcacaacccatgttaccaccaccgcctcatcaacctcaacaaatgcgcaaaccc
gatctgcactcatccagtcaacaccgttctcaccacagttcttcatcatcctcgtcttca
catcatccctccaaaattggctattcaccaggcgatgtacccgaccacaaactcagctcc
ggccacagcaagcaacctcaacaacagcaacagccgcagccttatggtggaagtaatatg
gtatctaatcgaccacctcgagagcacacctcttcgatgatggcgccctcatccaacaaa
tcatccagctcctcgtcgaggtcatcaatgtcgaataatctgccaggtcaacccataagg
cagtcttcatcacaaggtcatcatcccatggagggtaattatcacaagcccagggaacgc
aatatggcagtgccaccaccatcatctggccacaatatgccaccacatggtatcccccat
aaattggctcaaaaacaagatggaattcgatcaatgtcctccaaagatcattcaggtcgc
ttggcagcagatcaagctaataagcaaagtaacagtaacaaaatgtttccatcttctgtg
tcttcacaatacggaggcaacaatttacaaatgccgccaggcagcaatagtaacagtcaa
ttatcgtctaaactggatacaatgcatgatataacgcgtaacttaatgcatacatcgcgg
ggtggttacaataatccgccgccacaaacgcagccttccgctaatggtccggccgcacct
ctactcaactttcaccaacagcaacagcagggatcacgccacagcagtagtaatatcagc
aatagcaatactagtagcagtcttaagcatgaacaatccaaacaacaaatttccgtccat
atgcaacagcagacgcaaacagctgcccaccaccacaaacagccacaacctctacctaca
gatcagtcgtatggcagtttgagcggagctcacgatctgcaacaacagccacacgccgcc
tcccttattagcaataattatagtaaaattgaacctctacagcattccgaagaaccctca
cataatgttaaccaatataatcaacaagctcaaaatcatgctgcaaaagcggccaattct
ttgtttagtcccgaatggagtgataaactgcaaggacaacaacaggagcctcatatgtca
caacaggtgctacctctgcctgtacagggcagtggtctcaacagctatatgaatagttcc
tgcaatttgacacaaaatccagatgcttatgcagcaagtggctataaaataccttctagc
tctataagtagtaaggaaagtagtcctccaaagataaaaggcgaacgagacactccttcc
aagaaggataagaatcgttcaaattcgtctaatcaagataatggtcggtcggctgttggt
cacgcatcagcacaacaacaaattcttaaaactacaatacccaaaaaacttgattcgtca
ttatcaagctcattaacaggccttaacgaacttgctggtacaagtaatatgggttcagtt
ggcggcattaagcgacccaatgaaacggtcaccgttaaacaagatgacgatttactgatg
cgggacagcaaaatacgaaagattgatccgcctgccggcaacgacattggcaagcttcaa
gttgtgaatggcatagaaacaaatccagatttggtacgaaatctgcttaaggaaagtctg
tgcagcacaccttccattgttacaccaagtctacagccacctgccgaattatttgaaccc
tctgccactacctcatcaacaaatcaacacaacacctccataacatcgattagtactact
gtgctgtcaggtaattcggatgtctctgcaatggaaaccgatgatcatggcacatcgggc
agtaagtcggagaaaaagaagaaaaaggacaaacataaacacaaagagaaggacaagtcg
aaagatcgagaagaaaggaagaaacacaaaaaagataaagatcgccataaagataaggaa
cgtgaccgagaccacaacgacaatggaaattcaagtgccgcgggatctgcggaacatgtt
aaaataaaaatttccaaagaaaaactggaggctggtggagagcccattgggttcaaaatt
aaaatacccaaagatcgtataatgggtgatcttaatacaggttcctccggccaaacaaat
atcgattcatctgcatcgcatggtcccccggtcttgaaaatcaaaatatctaaggataag
ctggaaagctacagtagtggttcaaccgacttgggcgccggcttggctgccacaacgcat
ccatcatatggacataatccatcagtagcatatacatcctacggcgctgcaggttcacac
tccaacctctcaacaacaacgcatagtagcagcagtagtagcaagaaaaaagatcgcgac
cgcgagaaggaccgtgaacgagataaggacaagaagcgcagtcacgaatcttcatcgtcg
aaatcgaatggcagtggggtcggtggtggtagcagtggtttcatgactgctggagttgta
ggttcaaatgcaacaaatggctcaattgctggacaacaccactcgaactctatcagtggc
agtagtacaacgcaaaaagcgcaatattccagcaagttgcaagctctaagaaaacgttta
ttaaatttttttcctggtggaagattccaatccaaagtaaaaactaaaaaaacactatcg
aaacgtttttaa |