Calliphora vicina (urban bluebottle blowfly): 135956234
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Entry
135956234 CDS
T10781
Symbol
Prp5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135956234 (Prp5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135956234 (Prp5)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135956234 (Prp5)
Spliceosome [BR:
cvj03041
]
Complex A
U2 snRNP components
U2 related factors
135956234 (Prp5)
Complex B
135956234 (Prp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
135956234
NCBI-ProteinID:
XP_065362719
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All DBs
Position
4:complement(100419339..100424165)
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AA seq
1173 aa
AA seq
DB search
MSKSSSGRDRDRERERDRDREYERERDRDRDRERKRRYSRSRSRSPKDNRFARNGNGNNR
MRDERKRDRNERDPRDMERNRRDDKRRRQSPSKSKDYEREKFRQAERDREREREKERNER
DRERERQRDRERERERDREVEYARNTTSTPPIIIKAESSSSASEEELDKEEEQRRLELEM
IKRRERIERWRAERKLKEMEANKKEFKSVLPPTTTIHSAKKWSLEDESEEEDNSFVVELK
KEPDSPPSKFHRIKKPKDDDDDEKVYRLKSKSIVIAAKAKIEALREEEEAKEEKQKLQIQ
LQQQKIQQQQLEQRKLKEKLEMEKLEEKSNTIDNAGNNMATDEDDEIDPLDAYMQEVDKE
VRNVNHIVTQPKQNQQGVVILTGVAKKTTKDKHKGELIEQNMDSLEYSSEEELEDIKDTA
ASLANKHRKELAKIDHSGVDYAAFRKNFYVEVPELARMTQQEVEKYRTELEGIQVKGKGC
PKPIKTWAQCGVSKKEMDILRKLCFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFI
LPMFRHILDQPPLEDGDGPISIIMAPTRELCMQIGKDIRKFAKSLNLQAVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRII
DNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGARSIVCKDVAQHVAIMEDDAKFF
KLLELLGIYQEKGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTILDFKS
GKVRLLIATSVAARGLDVKDLILVVNYDVPNHFEDYVHRCGRTGRAGKKGSAWTFLTHDQ
GRYAGDIIRALELAESIVPDDLQKLWTDYKNAQEAEGKKVHTGGGFSGKGFKFDEQEANA
AKESKKLQKAALGLADSDDEEDIEQDIDQQIEQLFAAKRTVKDTSIPTPAVTMVTTPTAG
STVIAAGTAPAASVITTPAAGALGSDKLELAKRLASKISSNKNLGIDGKVSTQVAADAIL
KGTATGQPMITARSVVEQLAAKLNNKLNYQPKDEEEIATISGILPNQPNSFTKYEEELEI
NDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPTGKNPPEGERKLYLAIESCSELAV
QKAKREITRLIKEELLKLSSAHHVFNKGRYKVL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagtagttcaggaagagatcgtgatcgtgaaagggaacgtgacagagatcga
gaatatgaaagagagcgtgacagagatcgtgatagagaaagaaaacgtcgttattccagg
agtagatctcgatcgccaaaggacaacagattcgcccgcaatggtaatggcaacaaccga
atgagggatgaaagaaaacgtgatcgcaatgaacgtgatcctagggatatggaacgtaat
aggcgcgatgacaaacgcagaaggcaatcgccatctaaatcaaaagattatgaacgtgaa
aaatttcgccaagcagaacgcgatcgagagagagaacgtgagaaggaacggaacgaaagg
gatcgtgaacgagaacgacaaagagacagagaaagggaacgtgagcgtgaccgcgaagtt
gaatatgcacgcaatacaacctctacaccaccaataataatcaaagcagaatccagtagc
tcagcatctgaagaggagcttgataaagaagaggaacaaaggcgtttagagcttgaaatg
ataaaacgtcgtgaacgcattgaacgttggcgtgcagaacgtaagctcaaagaaatggaa
gcaaataaaaaagaattcaaatcagtactaccgccaacgactactattcattctgccaaa
aaatggagtcttgaagatgaatctgaagaggaggataacagttttgtagttgaactcaag
aaggagccagactcgccgccatcaaaatttcatcgcattaaaaaacccaaagatgacgat
gatgacgaaaaggtatatagattaaaatcgaaaagtattgttatcgcagctaaggcgaaa
atcgaagcactcagagaagaggaggaggctaaagaagaaaaacaaaaattgcaaattcag
ttacaacagcaaaagattcaacaacagcagttagaacaaaggaaactaaaggaaaagcta
gaaatggagaaacttgaagaaaagtctaatacaatagataatgctggcaataatatggcg
actgatgaagacgatgaaattgatccattggatgcttatatgcaagaagtcgacaaagaa
gtacggaacgttaatcatattgttacccagcccaagcaaaatcaacagggcgtcgttatc
cttactggtgtggcgaaaaaaactacaaaggacaaacataaaggtgaacttattgaacaa
aacatggacagcctagagtattccagcgaagaggaattggaagatataaaggatactgca
gcaagtttagcgaataaacatcgtaaagaattggctaaaatcgatcattccggcgttgat
tacgcagcatttcgtaaaaatttctatgtcgaagtaccagagctcgcccgcatgacacag
caagaagttgaaaaatatcgcacggaattggagggaatacaagttaagggcaaaggttgt
cccaagccaattaagacgtgggctcaatgtggtgttagcaaaaaggaaatggatattcta
cgtaaattgtgttttgaaaaaccaactcccatacaatgtcaagcgattccggccattatg
tctggacgtgatctaataggtattgctaaaacaggcagtggcaaaacgctagcattcatt
ttaccaatgtttaggcacattttggatcaacctccattagaagacggcgatggtccaatt
tcaattattatggctcctacccgtgaattgtgtatgcaaattggcaaagatattaggaaa
tttgcaaaaagtttaaatctacaagcggtatgcgtctacggtggcacaggtatctcggag
cagatcgctgaattaaaaaggggcgccgaaattattgtatgcactcccgggcgtatgata
gacatgttggccgccaattcgggacgtgtgactaatttgagacgtgtaacatatatagtg
ttggacgaggccgatcgtatgtttgatatgggttttgagccgcaagtaatgcggatcata
gataatgtgcgaccagaccgacagacggttatgtttagtgccacattccctcgtcaaatg
gaagctttggcacgtcgcattctaaagaaaccgatagaagtaattgttggcgcccggtca
atagtgtgcaaagatgtcgcacagcatgttgccataatggaggatgatgctaaattcttt
aaacttttagaactgttaggtatttatcaggaaaagggtagtattatagtttttgttgat
aaacaagaaaatgccgacatacttttgcgcgatctaatgaaggcctcgtatccctgtatg
agtttgcacggaggcattgatcagttcgatcgagattcgacaattttagacttcaaatct
ggtaaggtgcgtttattgatagctacatctgtagcagctcgcggtttagatgtgaaggat
ttaattttagttgttaattatgacgtacccaatcactttgaagattatgttcataggtgt
ggtcgaacaggacgtgccggcaaaaagggtagtgcatggacatttctcactcacgatcaa
ggccgttatgctggtgacattataagagccttggagcttgccgaatctatagtaccggat
gacttgcaaaaattatggactgattataaaaatgctcaagaagctgaaggaaagaaagtt
catactggcggcggttttagtggaaaaggttttaaattcgacgagcaagaagctaatgcc
gctaaggaaagcaaaaaacttcagaaagctgcgctgggtcttgctgattccgatgacgaa
gaggatattgaacaagatatcgaccagcaaattgaacaactgtttgcagcaaaacgcaca
gtcaaggatacttccatacccactcctgcagttactatggtaaccacccctacggcgggc
agtacggtcattgcagctggcaccgctccagcagcttctgtcattacgacaccagctgct
ggggctttgggctctgataagcttgaattggccaaacgtctggcatcaaagataagctcc
aataaaaacttaggaatcgatggcaaggttagcactcaagtggctgccgatgctatactc
aagggcaccgcaactggccagccaatgattactgcccgttccgtagtggaacagttggct
gccaaactgaacaataaactcaattatcaacccaaagacgaagaggaaattgctaccata
tctggaattcttcccaatcaacccaattccttcacaaaatatgaggaagaactcgaaatt
aatgatttcccccaacaagcacgctggaaagttacttcaaaagaagctctggctcaaata
tccgaatattcagaagctggtcttacggtgcgcggcacctatgtaccaactggtaaaaat
ccccccgaaggtgaacgcaaactttatttggccatagaaagctgtagtgaactggctgta
caaaaagcgaaacgggaaataacccgtcttatcaaggaagagttgctaaaacttagttca
gcccatcacgtcttcaataagggaagatataaagtactttaa
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