Calliphora vicina (urban bluebottle blowfly): 135956389
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Entry
135956389 CDS
T10781
Symbol
Dbp80
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135956389 (Dbp80)
03015 mRNA surveillance pathway
135956389 (Dbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135956389 (Dbp80)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135956389 (Dbp80)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135956389 (Dbp80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
DUF1811
Motif
Other DBs
NCBI-GeneID:
135956389
NCBI-ProteinID:
XP_065362930
LinkDB
All DBs
Position
4:complement(97673420..97783698)
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AA seq
462 aa
AA seq
DB search
MDWAKKAEDQVSKLVSNLEIEKKEDDSNEKKEEEADVSSAETSLLLKIIRKGLVESKLDL
EVQRQDPTSPLYSVKTFEKLHLKPEILKGIYAMGFNAPSKIQENALPILLADPPQNMIAQ
SQSGTGKTAAFVLAMLSRVDTKLDYPQVLCLSPTYELAIQTGEAAARMAQFCPDIKLKFA
VRGEEVLPGTKLSDHIIIGTPGKVLDWGLKYRAIDLKKIRVFVLDEADVMIATQGHHDQC
IRIHKQLSSKCQMLFFSATYDKEVMEFAEHIVPEANIIRLKREQESLDNIKQYYVRCHSE
DEKYLAIQNIYGSITIGQAIIFCHTRKAAGWLAGKLSSDGHSVAVLSGDLTVEQRLAVLD
RFRIGLEKVLITTNVLSRGIDVEQVTIVVNFDLPMDAKGNADCETYLHRIGRTGRFGKNG
IAINLVDSEKAMAICRTIEHHFKKNIKELNADNTEEIEKIGT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggattgggccaaaaaagcagaagaccaggtatccaaattggtcagtaatttggaaatt
gagaagaaagaagatgattcaaatgaaaaaaaggaagaggaagccgatgtaagttcagcg
gaaacaagtcttttgctcaaaatcataagaaaaggtttagtggagtctaaactggattta
gaggttcaacgtcaggatcccacatcgccattgtattctgtaaaaacatttgaaaaacta
catttaaagcccgagattttaaaaggaatttatgccatgggcttcaatgctccttcaaaa
attcaggaaaatgctttgccaatactattagccgatcctccacaaaatatgatagcacaa
agtcagtctggtactggaaaaactgccgcctttgttcttgcaatgttaagcagagtggat
actaaactggattatcctcaggtcctttgtttatctcctacgtatgaactggccattcag
actggagaggctgccgctagaatggcacaattttgcccagatataaaattgaagtttgca
gtccgaggtgaagaagttttaccaggcaccaaattatcagaccatataataataggtaca
ccaggcaaagttctcgactggggtcttaaatatcgtgctatcgacttaaagaaaattcga
gtttttgtgttagatgaagctgatgttatgatagccacccaaggacatcatgatcaatgt
attcgtattcataaacaactatcatcaaagtgtcagatgctatttttttcagctacatat
gataaggaagtaatggagtttgcagagcacattgttcctgaagcaaatattattagactt
aaaagggaacaagaatcacttgacaacattaagcaatattatgtaagatgtcattcggaa
gatgaaaaatatctggcaattcaaaacatatatggcagcataactataggacaagcaatt
attttctgtcatactcgcaaggcggctggttggttagcaggaaaattgtcatcagatggc
cattccgttgctgttctctccggtgatctaactgtggaacaaagattagctgtacttgat
cgttttaggataggtttagaaaaagtactgataacgactaatgtgttgtcacgaggtatt
gatgtcgaacaagttacaattgtcgtaaactttgatctaccaatggacgccaagggcaat
gccgattgtgaaacttatcttcatcgcatcggaaggactggaagatttggtaagaatggc
attgcaataaatctagtagacagtgaaaaagcaatggccatctgtcgcactattgaacat
cactttaagaaaaatatcaaggaacttaatgctgacaacaccgaagaaattgaaaaaatc
ggaacttaa
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