Calliphora vicina (urban bluebottle blowfly): 135956450
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Entry
135956450 CDS
T10781
Symbol
Rga
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135956450 (Rga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135956450 (Rga)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135956450 (Rga)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135956450 (Rga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
135956450
NCBI-ProteinID:
XP_065363026
LinkDB
All DBs
Position
1:31168646..31190304
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AA seq
567 aa
AA seq
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MANLNFQQPPRSIANASLTGRTTGGFGGSSLSGHVTPTSGMFPSGANYGQTQPQLSPNRN
AQLSVGGPALTSGNRANVFNQRPYVERRMQGLGQGPMSNMGNFMQSRGGYGTTGSGGGGG
GGAAGGPLNNFHNVFGGSGDTTTPALLDPSEFPSLTNARGQNDQSLPQTNPLQPPGSKPY
GNFFTSFGMVKQPTSEQSEFTMSNEDFPALPGTQNSDGTTNAGSGLTDSNNLDGTDKTMN
SIVANSGLGAVGSGAVGSGSSVGGGVIGGSSGQGGVGVVGGGVGVGAPVSTAGGNFGSGI
GGIVSSGGVSSSAPSGSGTTSGISGMGNSGSIEQQQQQQQQQQQQQQQHPNDNSSDNKLM
KTGVQTSPDGKVTNIPASMVNNQFGMVGLLTFMRAAESDPNLVTLASGIDLTGLGLNLNS
QESLHPTFAGPFADHPCRAQDVECNVPPEYLINFAIRDKLSSPHLKKLQEDLLFFLFYTN
IGDIMQLMAAAELHSREWRYHIEEKIWITRIPGPNQYEKNGTKERGTFYYFDAQSWKRLS
KVFQIDPEKLDKCPNLSAFMNINGQSV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttaaattttcaacaacccccaagaagcatagcaaatgcatctctaacgggc
agaactacaggcggttttggtggtagttcattatccggtcatgtaacacccacgtcaggc
atgtttcccagtggagcgaattacggacaaacgcaacctcaattatcaccgaatcgtaat
gctcagctgtcggtcggtggtcctgcgttaacaagtggtaatcgtgcaaatgtttttaac
cagcgtccatatgtggaaagacgtatgcaaggtctaggtcaggggcctatgtcgaacatg
ggcaactttatgcaaagtcgtggtggttacggtacgactggtagtggtggtggaggtggt
ggcggtgccgctggtggacctctcaataatttccataatgtttttggtggcagtggggat
acaacaacgccggccctgctcgatccttcagaatttccatctctgacaaatgctcgcggc
cagaatgatcaatcactgcctcagacgaatcccctccagccgccgggaagcaaaccttat
ggtaatttctttacctcttttggcatggtaaaacaaccaacatcagagcaatcggaattc
acgatgtctaatgaagatttccctgcgttaccgggcactcaaaactcggatggtacaacg
aatgcgggaagtggtctaacagatagtaataatttggatggtacggataagacaatgaat
tcaattgtagccaacagtgggttgggagctgtgggtagtggtgcggtaggatcaggctca
tcagttggtggtggtgtcattggtggtagtagtggacaaggaggtgtcggtgtagttggt
ggtggtgttggtgttggagcgcctgttagtacagcaggtggcaattttggcagtggtatt
ggtggtattgttagctctggtggtgtgagtagttcagcacccagtggtagtggtacaaca
tctggcattagtggtatgggtaatagtggtagcattgaacaacaacaacaacagcagcag
caacaacaacaacagcaacaacaacatccgaatgataattccagcgataacaaattgatg
aaaaccggcgtgcaaacatctcccgatggcaaagtcacaaatataccggcgagtatggtg
aataatcaatttggtatggtgggtttattaacgttcatgcgtgccgctgaatccgatcca
aatttggttacattagcctcaggcattgatttaactggtttaggtttaaatctcaattcc
caagaaagtttacatccaacgtttgctggaccgtttgcggatcatccctgcagagcacaa
gatgttgaatgtaatgtgccacctgaatatttgataaacttcgcgataagagataaactt
tcctcgccacatttaaaaaaactgcaagaagatctgctttttttcctgttctatacaaat
atcggcgatatcatgcagcttatggcagccgcagaattacatagtcgcgaatggagatat
catatagaggaaaaaatctggataactcgaattcctggccccaatcaatatgagaaaaat
ggtacaaaagaacgtggcaccttttactatttcgatgcgcagagttggaaacgtttgtcc
aaggttttccaaatcgatcccgagaaattagataaatgccccaatttaagtgcgtttatg
aacataaatggacagtctgtataa
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