KEGG   Calliphora vicina (urban bluebottle blowfly): 135956521
Entry
135956521         CDS       T10781                                 
Symbol
RfC4
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cvj  Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03030  DNA replication
cvj03410  Base excision repair
cvj03420  Nucleotide excision repair
cvj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cvj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135956521 (RfC4)
   03410 Base excision repair
    135956521 (RfC4)
   03420 Nucleotide excision repair
    135956521 (RfC4)
   03430 Mismatch repair
    135956521 (RfC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvj03032]
    135956521 (RfC4)
   03036 Chromosome and associated proteins [BR:cvj03036]
    135956521 (RfC4)
   03400 DNA repair and recombination proteins [BR:cvj03400]
    135956521 (RfC4)
DNA replication proteins [BR:cvj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    135956521 (RfC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    135956521 (RfC4)
Chromosome and associated proteins [BR:cvj03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    135956521 (RfC4)
DNA repair and recombination proteins [BR:cvj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     135956521 (RfC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    135956521 (RfC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Rad17 Mg_chelatase Viral_helicase1 RCF1-5-like_lid nSTAND3 AAA_19 AAA_18 MeaB AAA_24 AAA_5 RuvB_N AAA_11 ABC_tran DNAX_ATPase_lid AAA_assoc_2 AAA_23 RNA_helicase NTPase_1 MnmE_helical AAA_2 DEAD AAA_28 AAA_30 AAA_7 AAA_3 MCM SRP54 AAA_29 AMP-binding_C_3 KTI12 IstB_IS21 ATPase_2 AAA_33 bpMoxR FtsK_SpoIIIE ATP_bind_1 cobW CbiA DUF815 AAA_25 SRPRB
Other DBs
NCBI-GeneID: 135956521
NCBI-ProteinID: XP_065363126
LinkDB
Position
4:72368962..72370234
AA seq 331 aa
MPEVELTADELKRRNLPWIEKYRPAKFDEIVGNEDTVARLSVFATQGNAPNIIIAGPPGV
GKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQALRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLA
KLIEVCQRENLEYDEEGLEAIVFTAQGDMRQGLNNLQSTAQGFGKITGANVFKVCDEPHP
MLIQDMLQHCAENDIHKAYKILAKLWRFGYAAEDIIGNIFRVCKRLNVDEHMKLNFIREI
GVTHMKVVDGLNSLLQLTSLLARLCEIADAQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccagaggtagaattaactgcagatgaacttaagaggcgtaatttgccatggattgaa
aaatatcgaccggcaaaatttgatgaaattgtgggtaatgaggataccgtggcccgttta
tccgtctttgctacccagggtaatgctcccaacataattatagcgggtccacctggtgtg
ggcaaaactacaaccattcagtgtttggccagaatattacttggtgacagttataaagaa
gctgttttggaattgaatgcctcaaacgagcgtggcattgatgtagtgcgtaataaaatt
aaaatgtttgcccaacaaaaagtcacactaccccgtggtcgccataagattgttatattg
gatgaggcggacagcatgaccgagggtgctcagcaggctttgaggcgcaccatggaaatt
tacagtaataccacacgttttgccctggcctgtaatacgagcgaaaagataatagaaccc
atacagtctcgttgtgccatgttgcgttttacaaaactatcagatgcccaggttttggcc
aaacttatcgaagtgtgccaacgtgaaaatctcgaatacgatgaagaaggtctggaggcc
atagttttcacggcacagggtgatatgagacaaggtttgaataatttacaatccacagct
caaggttttggtaaaataacgggagcaaatgttttcaaagtgtgcgatgaacctcatcct
atgcttatacaggatatgttgcaacattgtgctgaaaatgatatacacaaagcctacaaa
atattggccaagttgtggcgttttggttatgccgcagaggatattattggtaatatattt
cgtgtctgcaagcgtttgaatgtggatgaacatatgaagttgaattttatacgtgaaatt
ggagtgacacatatgaaagtcgttgatggcctgaactccttactacaattaactagtttg
ctggctaggttatgtgaaattgcagatgcccagtaa

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