Calliphora vicina (urban bluebottle blowfly): 135956674
Help
Entry
135956674 CDS
T10781
Symbol
Spt6
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvj03021
]
135956674 (Spt6)
03036 Chromosome and associated proteins [BR:
cvj03036
]
135956674 (Spt6)
Transcription machinery [BR:
cvj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135956674 (Spt6)
Chromosome and associated proteins [BR:
cvj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135956674 (Spt6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Spt6_S1
SH2
HHH_9
HHH_3
Tex_YqgF
OB_RRP5_4th
S1_RRP5
Tex_N
STAT2_C
DUF2924
Motif
Other DBs
NCBI-GeneID:
135956674
NCBI-ProteinID:
XP_065363295
LinkDB
All DBs
Position
4:96831807..96913055
Genome browser
AA seq
1756 aa
AA seq
DB search
MADFLDSEAEESEEEEELEVHEKKKLKKLKAMADSSEEEEEDDDERLREELKDLIDDNPI
EEGSDGEDSDVSNSSKKRKKHEEDDDLDDRLEDDDYDLIEENLGVKVERRKRFKRLRRIQ
DEESDGEVDNVDEGLAREAIAEQLFDDDENIERRSEHSHREPENFEEEEEDSDSDADDFI
VDDEGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDEYEDDSDGEEYDEE
AGEDDRGRVKKKLTKKQPKKTIFDLYEPSELKRGHFTDLDNEIRKTDIPERMQLRQIPVT
SVPEGSSELDNEAEWIYKHAFCKAPVSQNDKGESNREKNRKPPSTIGKIKQALEFIRNQQ
LEVPFISFYRKEYVKPELTTDDLWKIYYFDERWCQLLSRKNKLLILFEKMRNYQLSEIMK
KTDSDLPEDIRLIKDDDLERLRDVQSMEELKDVHMQFLLYYSHEIPKMQEEERIKERDIR
KQQRREQRRQDMENSEQPSEEVNSDQDSADETEVVEDHLKQAKDSGPYAMCRKAGICGFA
KHFGLNPEQFAENVRDGYQRHEVDQQQISPTDLAKQYLCPKFMTIDEIIHAAKFVVARQL
SREPLFRKTVREVYFERAKLNVRPTKKGIKEIDENHACYPMKYLSNKPIRDLVGDQFLRL
TMAEEDNLIDINIADEIEGNTTNSYIDEAKQLYQRDEFSKVVQEWNSIRAECVELALKKM
IIPDLKKELKVIILAEAKEYVLKSCCTKLGNWLRVAPYKPEISDEYTFDDWGTVKGIRAL
GLAYVPDYSQAAFCAITNPENDVSDYLRLPHILKRKSSYRPEEKSLKISDLKILKQFIRN
KKPHVVVIGGESREAQMIQSDIREIIKELVDEEQFPEIGVEIVDNELAKIYANSQKGASD
FKEYPTLLKQAVSLARKIQDPLLEYSQLCGADEEILCLRYHSLQDQISKEELLEHLYIQF
INQTNEVGVDINMAVQNSYTLNLVQFICGLGPRKGAALVKILKQSNQRLENRTQLVTLCH
LGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAIDAMEYDDEETN
PAGALEEILESPERLKDLDLDAFAVELERQGFGNKSITLYDIRSELNSLYKDFRAPYRSP
NSEELFDMLTKETPESFYVGKMVLATVAGISHRKPQGDQLDQANPVRNDETGNWQCPFCL
KDDFPELSEVWNHFDAGACPGQATGVKLRLDNGISGFIHIKNLSDKHVKNPEDRVQAGQA
IHIRIIKIDVDRFSVDCSSKSSDLMDKNHEWRPRRDAFYDYEQEEKDNAKENDQKQVRSK
QQYVKRVIIHPSFHNKSYAEVLKIMESMDQGEVVVRPSSKGSDHLTVTWKVTNDIYQHID
VREEGKENAFSLGQSLLIGNDEFEDLDEIIARHVNPMAACARELLSYKYYRDTGGGLKDK
MEELLKEEKLKDPRKIHYFISASKNYPGKFLLSYLPKTKCRHEYVTVVPEGYRFRGQVFD
SLNGFLKWFKDHYSDPIVSNTPMSTPHTNSSVRNSAGYDTPRNNDSKSSSQHMSQSIAAH
TPHFTSTPGYHGGYVNTPYTPSGQTPFMTPYATPHTSQTPRYGNSTPSPSSATSHINYGH
QSHNIKGVKGASYHAASPRSLDINTHSKINRSHRNNSNNNESLEWKIASDSWARRKRPVM
PPTRTFTNDSARPENYGVPQTGNDYSHQTSNQYVDDHRSRSVEYQKSPRSIRSTPRTNTS
PHSMNLGDSTPLYDEN
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcttggactctgaagcggaggaatccgaggaggaggaagagcttgaagta
catgaaaaaaaaaaactgaaaaaattaaaagcaatggctgatagcagtgaagaagaagaa
gaagatgatgatgaacgattgcgagaagaacttaaggacctaattgatgacaatcccata
gaagaaggaagtgatggagaggattctgacgtatcaaattcatcgaaaaagagaaaaaaa
catgaggaagatgatgatttggatgaccgattagaagacgatgattatgatttgattgaa
gaaaacttaggtgtaaaagtggaaagaaggaaacgctttaaacgcttaagacggatacaa
gatgaagaaagcgatggagaggtagataatgtcgatgaaggtctagctagagaagctatt
gctgagcaattgtttgatgatgatgagaatattgaaaggcgttcagagcacagtcataga
gaacctgaaaattttgaagaagaagaagaagattccgattcggatgctgatgattttatt
gttgatgatgaaggccgtccaatagctgaaaagaaaaagaaacgaagaccaatttttaca
gatgcatctcttcaggaaggacaggatattttcggggtagactttgattatgatgatttc
tctaaatatgaggaagatgaatatgaagatgattccgatggagaagaatacgatgaggaa
gctggggaagatgatcgtggaagagtcaagaaaaaattaacaaaaaaacaaccgaaaaaa
acaatattcgacttatatgaaccaagtgaattaaaacggggtcattttacagatcttgac
aatgagataagaaaaactgatattcctgaacgcatgcaacttagacaaattcctgtaaca
tcagttcctgaaggatcctccgagttggacaatgaagcggaatggatatataagcatgct
ttttgtaaagcaccagtgtcgcagaacgataaaggtgaatcaaatcgtgaaaaaaataga
aaaccgcctagtacgataggaaagattaagcaggctttggaatttattagaaaccagcaa
ttagaagtcccatttatatcattttatcgaaaggagtatgttaaaccagaactaacaaca
gatgatttatggaagatatattactttgatgagcgctggtgtcaattactcagcagaaag
aataaacttttaatactttttgagaaaatgcgcaactaccaacttagtgaaataatgaag
aaaacggatagtgacttacctgaagatattcgtttaataaaagatgacgatttggaacgt
ttgcgtgatgttcaaagtatggaagaattaaaagatgttcatatgcaatttcttttgtat
tattctcatgaaataccaaaaatgcaggaagaagagaggataaaagaaagagacatcagg
aaacaacaaagaagagagcaaaggcgtcaagatatggaaaatagtgagcagccatctgaa
gaagttaattcagaccaagacagcgcagatgagactgaagttgttgaagatcatttgaag
caagctaaggattccgggccatatgcaatgtgtcgaaaggccggaatttgcggttttgcc
aaacactttggtttgaacccagaacagtttgccgaaaatgttcgagacggctaccagcga
catgaagtcgatcaacaacaaataagtccgacagatttggcaaaacaatatttgtgtcca
aaatttatgacaattgacgaaattatacatgctgctaaatttgttgttgctcgccaactt
tctagggagcctctttttagaaagacagttcgggaagtgtattttgaaagagccaaacta
aatgttcgtccaactaaaaagggtataaaagaaatagatgagaatcatgcatgttatcca
atgaaatatttgtcaaataaaccaattagagatctagttggtgatcagtttctcagactg
actatggcggaagaagataatcttattgacatcaatatagccgacgaaattgaaggaaac
actacgaattcttatattgatgaagcaaaacaactataccaacgtgatgaattttcaaaa
gtcgtgcaggaatggaattctattcgagcagagtgtgtcgagctggcacttaaaaaaatg
attataccagacttgaaaaaagaattgaaagttattattttggctgaggcaaaggaatat
gtattgaaatcttgttgtactaaattagggaattggttaagagtagctccttataaacct
gaaatttctgatgaatatacatttgatgattggggtaccgtaaaaggaattcgtgcactg
ggacttgcatatgtccctgattattctcaggctgctttttgtgcaataacaaacccagaa
aatgatgttagtgactatttgcgcttacctcatatattaaaacgtaaaagttcttatcgt
cctgaagaaaaatcattaaaaatatcggatcttaaaattttaaaacaatttattcgcaat
aagaaaccacatgttgtagtaataggtggagaatctagggaggctcaaatgattcaaagt
gatataagagaaattattaaggaactcgttgatgaagaacaatttccagaaattggggtt
gaaattgtagataacgaacttgcaaagatttatgcaaattcccaaaagggtgcatctgat
tttaaagaatatccaacacttctcaagcaagcagtgtctttagcaagaaaaatccaagat
ccccttttagagtactctcaactttgtggagcagatgaagaaattttgtgtttgcgatac
cattccttgcaagaccagataagtaaagaagaactattggaacatctttatattcaattt
ataaatcaaacaaatgaagtgggcgtggacataaatatggctgtacaaaactcttacaca
ttaaatttggttcaatttatatgtggtttaggtcccagaaaaggtgctgcattagtaaaa
atacttaaacaatctaaccagagactagaaaatagaactcagcttgtaacattgtgtcat
ttaggacctaaagtttttattaattgttctggttttattaaaattgatacaagttcccta
ggggacagcacagaagcgtatgttgaggtacttgacggctccagagttcatccagaaaca
tatgaatgggccaggaaaatggcaatagatgcaatggaatatgatgatgaagaaactaat
ccagccggggctctggaggaaattcttgaaagtccagagaggttgaaagatctcgatctg
gacgcatttgctgtagaattagagcgtcagggatttggaaacaaaagtataacattatac
gatataagatcggaattgaattccttatataaagactttcgagctccatatcgctcgcca
aactctgaagaattatttgacatgttaactaaagaaactcccgaatcattttacgtgggt
aaaatggttttggctacagttgcgggtatttctcaccgtaagccccaaggcgaccaatta
gatcaagcgaatccagttagaaatgatgaaactggaaattggcaatgcccattctgtctg
aaagatgattttcccgagctctcggaagtttggaatcattttgatgccggagcatgccca
ggtcaagcgactggagttaaattacggcttgataatggtatatctggttttattcacata
aaaaacttgtcagataaacatgtaaagaatccagaagaccgtgttcaagctggtcaagca
attcatattagaataattaaaattgacgttgatcgtttttcagttgactgttcgtctaaa
agttcagatttaatggacaaaaatcacgaatggcgcccaagaagagatgcgttttacgat
tatgaacaagaagaaaaggacaacgcaaaagaaaatgatcagaaacaggttcgatcaaag
cagcaatacgttaaaagagttattatacatccatcatttcataacaaatcatatgctgaa
gttttgaaaataatggaatcaatggatcaaggtgaagtagttgtaaggccttcgagcaaa
ggctcggatcatttaacagtcacttggaaggttaccaatgatatttatcaacatatagat
gtacgagaagagggtaaagaaaatgcatttagtttaggacagagtttacttattggaaat
gatgagttcgaagatttagatgaaattatagccagacatgtaaatccaatggctgcttgt
gctcgtgaattgttaagttacaaatattatcgtgatacaggtggcggtttaaaagataaa
atggaagagcttctaaaggaagagaaattaaaagatccacgaaaaattcattactttata
tcagcatcaaaaaattacccaggaaaatttttactatcatatttgccaaaaactaaatgc
cgtcacgagtatgtaaccgttgtgccagaaggttatagatttagaggacaagtatttgac
tcactaaacggtttcctaaaatggtttaaagatcactattctgatccgattgtatcaaat
actccaatgtcaacacctcatactaactcaagtgtgcggaatagtgctggatacgacaca
cctagaaacaatgattcaaaatcttcatctcaacacatgtcacaaagtattgctgctcat
actccgcattttaccagtacaccaggatatcatggaggttatgttaatactccttacact
cctagtggccaaacaccatttatgacaccatacgcaactccacatacatcacagactcct
cgatatggcaactctacgccaagtccaagttctgcaacttctcatattaactacggccat
cagtcgcataatataaaaggtgtaaaaggcgcatcgtaccatgcagcatctccaagaagt
ttagacattaacactcatagtaaaattaatcgttctcatcgaaacaacagcaacaacaac
gaaagtctcgaatggaaaattgcttcggattcgtgggctagaaggaaacgtcccgttatg
ccacctacacgcacttttacaaatgattccgctagaccggaaaattatggtgtgccccaa
acaggcaatgattattctcatcaaacttctaaccagtatgtggatgaccatcgatctaga
tctgtcgaatatcaaaaaagtcctagatccatacgtagcactccacgcacaaatacttcc
ccacattctatgaatttaggcgattcgactccattgtatgatgaaaattaa
DBGET
integrated database retrieval system
