Calliphora vicina (urban bluebottle blowfly): 135956953
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Entry
135956953 CDS
T10781
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03030
DNA replication
cvj03410
Base excision repair
cvj03420
Nucleotide excision repair
cvj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135956953
03410 Base excision repair
135956953
03420 Nucleotide excision repair
135956953
03430 Mismatch repair
135956953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvj03032
]
135956953
03036 Chromosome and associated proteins [BR:
cvj03036
]
135956953
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135956953
DNA replication proteins [BR:
cvj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135956953
DNA Replication Termination Factors
ELG1-RFC complex
135956953
Chromosome and associated proteins [BR:
cvj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135956953
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135956953
Check point factors
HRAD17(Rad24)-RFC complex
135956953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
RuvB_N
AAA_14
DUF815
AAA_16
ResIII
AAA_assoc_2
DEAD
AAA_7
AAA_5
PhoH
AAA_30
AAA_24
RCF1-5-like_lid
AAA_19
Mg_chelatase
TIP49
FtsK_SpoIIIE
T2SSE
bpMoxR
Motif
Other DBs
NCBI-GeneID:
135956953
NCBI-ProteinID:
XP_065363656
LinkDB
All DBs
Position
4:complement(34603127..34610355)
Genome browser
AA seq
333 aa
AA seq
DB search
MSEENTAKTSRMPWVEKYRPSKLDDLISHEEIISTINRFINQKQLPHLLFYGPPGTGKTS
TILACAKQLYTPAQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFSGTFKLIILDEAD
AMTNDAQNALRRIIEKYTENVRFCVICNYLSKIIPAVQSRCTRFRFAPLSPEQILPRLDK
IVELEDLNVTDDGKKALMTLSKGDMRKVLNVLQSTSMAFDIVNENNVYTCVGHPLRSDIE
KILETLLSCKNFEQAYNDIQAIKNVKGLALDDILTELHLFVMRLELPMSVMNKLIIKMAS
IEERLAKGCTEGPQTTALISAFFIHRDQVTLES
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaaatacagcgaaaacaagtcgtatgccatgggtggaaaaatatcgtccc
tcaaaattagacgatttaatatcgcatgaagaaattatatcaacaattaatcgctttatc
aaccaaaaacaattgccacatttgttgttttacggccctcccggtactggcaaaaccagt
accatattggcatgtgccaaacaattgtatacaccggcccaattcaaatcgatggttttg
gaacttaatgcttcggatgatagaggaattggcattgttagaggacagattttgaatttc
gcttctactcgaactatttttagtggcacctttaaattgataatactcgatgaagccgac
gccatgaccaatgacgcccaaaatgctctaaggcgtatcattgaaaagtacacagaaaat
gtacgtttctgtgttatttgcaactatttgagtaaaattattcctgccgtacagtctaga
tgtacacgttttcgttttgctcctctaagcccagaacaaatacttccacgcctagataaa
attgttgaattggaagatttgaatgttaccgatgatggaaaaaaagctttaatgactctc
tccaaaggagatatgcgtaaggtgttaaatgttctacaaagtacgagtatggcttttgat
attgtaaatgagaataatgtttacacctgtgttggacatcccttacgtagcgatattgaa
aaaatattggagacacttttgtcctgcaaaaattttgaacaggcctacaatgatatacaa
gctattaaaaatgtgaaaggcttagctttggatgatattctcacggaactgcatttattt
gttatgaggctggaacttccaatgagtgttatgaataagctaattataaaaatggcatcc
atagaagaacgattagctaaaggttgcaccgaaggccctcaaactacagctctaatatcg
gccttctttatacatcgtgatcaagtgacattggaaagttaa
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