Calliphora vicina (urban bluebottle blowfly): 135957932
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Entry
135957932 CDS
T10781
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03030
DNA replication
cvj03410
Base excision repair
cvj03420
Nucleotide excision repair
cvj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135957932 (Gnf1)
03410 Base excision repair
135957932 (Gnf1)
03420 Nucleotide excision repair
135957932 (Gnf1)
03430 Mismatch repair
135957932 (Gnf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvj03032
]
135957932 (Gnf1)
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135957932 (Gnf1)
DNA replication proteins [BR:
cvj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135957932 (Gnf1)
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135957932 (Gnf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
AAA_14
RuvB_N
AAA_33
AAA_30
PTCB-BRCT
RCF1-5-like_lid
AAA_5
RNA_helicase
AAA_16
DUF1757
AAA_11
Motif
Other DBs
NCBI-GeneID:
135957932
NCBI-ProteinID:
XP_065364852
LinkDB
All DBs
Position
1:complement(37191757..37196176)
Genome browser
AA seq
1059 aa
AA seq
DB search
MQPTIASFFQKASTSTNGHNKSKDNKPEPKKRKARVISSDEDDDIPESPKVSKSRDAKKS
KVENTATTSPPSSKKQPNLNKIKSPKKASVRPVDPMSLFGGETKRVEAKKSAKPKEKAML
EFEDNEIDQSLMEIDLEESVLESNKKEEDNVKEKSKKSDKNNSQEHKKSPEEKKESSRSS
KKEETKESSSSKKEERKESSSSSKREEKKESSGKKEEKTTPKETSKSEKHKKKSPKYDDE
EEDKPKNKKPRQKQQDLESSVLSDEERHERKRMTAMLYQKFKNRSAVLNPGSKEVPKGKP
NCLAGLTFLVTGVLESLERDEAGSIIKEYGGKTMTVVGKRLNYLIVGEDSGPKKLAQAEE
FGVKILSEDDFLNLIREKSGMKKEQSHDSSIRDDGEKPSTSPKQKKGESKEKKEQKEKVE
IKKEKLESPTEKKPKLEELNNNLGSHKIKKEMEDKKPEVKQEVKIKKEVEIKQEFPRPPP
VTEDMMTWVDKYKPATVKDIIGQQGAASNVYKLTNWLSKWYINHDGKKKLQKPNPWAKND
DGSFFKAALLSGPPGIGKTTTATLVCKELGFDAVEFNASDTRSKRLLKEEVSELLSNKSL
YGYFHGDSQAVTKKHVLIMDEVDGMAGNEDRGGIQELIGLIKESSVPIICMCNDRNHQKM
RSLVNYCYDLRFNRPQLKQIKGRIMSICAKENIKLDSGKIDEIIAATNNDIRQSINHISL
LSAGKDLNLASDKESKKYGEKTAEKDLKMGPWEVVRKVFSADEHKTMSFNDKCDLFFHDY
SLAPLFVQQNYLIVSPSGPKSEVLKKVALTANALSLGDLVDKKIRSSMAWALLPTQAVFS
SVMPGEYMSGHITGQINFPGWLGKNSRSTKRCRLAQEIHDHTRLRTSGSRLSVRLDYAPF
LLNKIVKPLVDKGLDGIEESLATLKEYHLLREDIDGLIELTTWPGKKGPMDKVDGKVKAA
LTRAYNKEVLAYTYSATAGVKKKRAEASDDMDQLAMEEGEEGSANVESEDEKDDALENDA
LIKAKKKTSSSTTKASTSKAAAGKKATTSKPKAAAKPKK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgactatagcttcattttttcaaaaagcatcaacctctaccaatggccacaac
aagtctaaagataacaaacctgagcccaaaaaacgtaaagctcgcgtaatttccagtgat
gaagatgatgatatacccgaatcgcctaaagtctccaaatcgagagatgccaaaaaatct
aaagtggaaaacacagctactacctcgccacccagcagcaaaaaacaaccaaacttgaac
aaaataaaatcacccaaaaaggcatccgtcagacctgttgatcctatgtccttgtttggt
ggtgaaactaaacgtgtagaagctaaaaagtcagccaaaccgaaagagaaagctatgctt
gaatttgaagacaatgaaatcgatcagagtctgatggaaatcgatttggaagaaagtgtt
ttagaaagtaacaaaaaagaggaggacaatgttaaggaaaagtctaagaaatcagataaa
aacaatagtcaggaacataagaagtcaccggaggagaaaaaggaatcatcgagatcttct
aaaaaggaggagacaaaggaatcatcgtcatctaaaaaggaggagagaaaggaatcatca
tcatcttctaaaagggaggagaaaaaggaatcatctggtaaaaaagaggaaaaaactaca
cctaaggaaacgagcaaatcagagaaacataagaaaaaatctcctaaatacgacgacgaa
gaagaagataaacctaaaaataagaaaccgagacaaaaacaacaggatttggaatctagc
gtcttatcggatgaagaacgtcacgaacgtaaacgaatgaccgccatgttgtatcaaaaa
tttaaaaatcgttctgcagtattaaatcctggaagcaaagaagttcctaagggcaaaccc
aattgtttggccggtttaacatttcttgttactggtgtgctagagtcactggaacgtgat
gaagcgggctctattataaaagaatatggcggtaaaaccatgacagttgttggcaaacgt
ttgaattatcttatagttggcgaagattctggtcccaaaaaactagctcaagctgaagag
tttggtgtaaaaattctcagtgaagatgatttcttgaatttaatacgtgagaaatcaggc
atgaagaaagaacaatcgcatgactcaagtattagagatgatggtgagaagccctcaact
agtcccaaacaaaagaaaggggaaagcaaggaaaagaaggaacaaaaggagaaagtggaa
attaaaaaagagaaactcgaatctcccacagaaaagaaaccaaagttagaggagttgaat
aataacctcggcagccataaaattaaaaaagaaatggaggataaaaaaccagaagttaaa
caagaagttaaaattaaaaaagaagtggagattaaacaggaattccccagacctccaccc
gttacagaagatatgatgacctgggtggataaatataaaccagccacagtaaaagatatt
ataggtcaacagggagcagccagtaatgtatacaagcttactaattggttatctaaatgg
tatataaatcatgatggtaaaaagaaattgcaaaaaccaaatccctgggccaaaaatgat
gatggtagtttttttaaagccgctttgctatccggtcctcccggcataggtaaaactact
actgccactttggtttgcaaggaattgggttttgatgctgtggaatttaatgcctccgat
acacgcagcaaacgtttgcttaaagaagaggtctccgaattactttccaacaagtctttg
tatggctatttccatggcgatagccaggctgttaccaaaaagcatgttctcattatggat
gaggtagatggtatggcgggcaatgaggatcgtggtggcatccaggaattaataggtctc
attaaggaatcttcggtccccattatatgcatgtgtaatgaccgtaatcatcagaaaatg
cgttcgctggtaaactattgttatgatttgcgtttcaatcgtccccaattgaaacagatc
aagggcagaataatgagtatttgtgccaaggaaaatattaaactggattcgggtaaaatt
gatgaaatcatagcggccaccaataatgatatacggcaatcgataaatcatatatctttg
cttagtgcgggcaaagatctcaacttggcttccgacaaagagtctaagaaatatggtgag
aaaacagctgaaaaggatttgaaaatgggtccttgggaggtggtacgcaaagttttctca
gcagatgaacacaaaaccatgtcgtttaatgataaatgtgatttgttcttccatgactat
agtttggctcccttgtttgtgcagcaaaattatttgattgttagtccctcgggacccaaa
tctgaagttcttaaaaaagtggctttaacagcaaatgctttaagtttgggagatttagta
gacaaaaaaatacgatctagtatggcttgggctctgctgcccacccaggctgtttttagt
tctgttatgcccggtgaatatatgagcggtcatataactggacaaattaactttcccggc
tggctgggtaaaaattctcgttccaccaaacgttgccgtttggcccaagaaattcacgat
catacccgcttgagaacttcgggttctcgtctgtctgtgcgcctagattatgctccattt
ttacttaataaaattgttaaacctttggtagacaagggtttagatggtatagaagaatct
ctagctactcttaaggaatatcatctcttgcgggaggatattgatggtttaatcgaacta
acaacttggccgggtaagaagggtcccatggataaagtagacggtaaggttaaggccgct
ctaacaagagcctacaataaggaagtactggcttacacatactcagctacagctggcgtt
aaaaagaagcgagctgaagcttctgatgatatggaccaattggctatggaggagggagaa
gaaggttctgcaaatgtagaatctgaagatgagaaggatgatgctttagaaaatgatgct
ttaattaaggctaaaaagaaaacttcttcctcaactactaaagcttctacttcgaaggct
gcagcaggcaaaaaagctactaccagcaaacctaaagctgcagctaaacctaagaaataa
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