Calliphora vicina (urban bluebottle blowfly): 135957956
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Entry
135957956 CDS
T10781
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135957956 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135957956 (Usp39)
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
135957956 (Usp39)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
CANIN
UCH_1
Motif
Other DBs
NCBI-GeneID:
135957956
NCBI-ProteinID:
XP_065364878
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All DBs
Position
4:18406100..18407974
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AA seq
490 aa
AA seq
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MPSKDEPAEKKAKTDLTNTNEDELDTPSVFNPKYRVCPYLDTINRPLLDFDFEKLCSISL
TRINVYACLVCGKYFQGRGTNTHAYTHSVAEAHHVFLNLQTLRFYCLPDNYEIIDSSLDD
IKYVLNPTFSPQDITNLDKSDPKHSRTVDGTLYLPGVVGLNNIKNNDYCNVVLHALSHVG
PLRDYYLREQHYAKIKRPPGDSIFNLVQRFGELMRKIWNPRNFKAHVSPHEMLQSVVLWS
NKRFQITEQGDPIEFLSWFLHTLHRALKGNKRADSSIINKIFLGEMKIYTRKIPPVELDD
TQKTLLLATEEYQEKCEDSNFLYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGKFNGTTE
KEYKTYKDNFLKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFGDILSIP
NREKLPDSKYNLVANIVHDGEPNKGTYRVHILHKSNGQWYEMQDLHVTEILPQMITLTES
YIQIYERCID
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaaagacgagccagcagagaagaaagccaaaactgatttgacaaacaccaat
gaagatgaactagataccccatcagtgtttaatcctaaatatcgggtatgtccttatttg
gataccataaaccgtcccctgttggatttcgattttgaaaagttgtgttccatctcactc
acgcgtataaacgtttatgcttgcctggtgtgtggtaagtacttccagggtcgaggtacc
aacactcatgcgtatacacattcagtagcggaggctcatcatgttttcttaaatttgcaa
accttaagattctactgtctgccggataattatgaaattattgattcatcattggatgat
attaaatacgttctcaatccgacattttcgccacaggatataacgaacttggacaaatcc
gatcccaaacattctcgtacggtagatggtactttgtatttgccgggtgttgtgggtttg
aataatattaagaacaatgattattgcaatgtggtattgcatgctctgtcgcatgtggga
cctttaagggattactatttgcgtgaacagcattatgccaaaatcaaacggccacctgga
gattctattttcaatctagtgcaacgttttggtgaacttatgcgtaaaatttggaatccc
cgtaattttaaggcacatgtatcgccacatgaaatgctgcaatcggttgtgctgtggtcc
aacaaacgttttcaaatcaccgagcagggcgatcccattgaatttttgtcatggtttttg
catacgctacatcgtgccttaaaaggtaacaaaagagcagactcatccataattaataaa
atctttttgggtgaaatgaaaatatatacccgcaaaataccgccagtggaactggatgat
acacaaaagacattattgctggctaccgaagaatatcaagagaaatgtgaggattcaaat
ttcctctatctaacatgtgatttacctccaccacctttatttaccgatgagttcagggaa
aatattatacctcaagtcaatctttatcagttgctgggtaaatttaatggtaccaccgaa
aaggagtataaaacctacaaagacaattttctgaaacgttttgaaatcaccagactgcca
cagtttataatattgtacataaaaagatttacgaaaaatacattcttcttggagaaaaat
cccacaattgttaactttccaatcaaaaatgttgattttggcgatatattgtctatacca
aatcgtgaaaagctacccgatagtaaatataatttagtggcaaatattgttcacgatggt
gaacccaacaagggtacgtatcgtgtgcacattttacacaaatccaatggccagtggtat
gaaatgcaagatttacatgtcacagagatactgccacaaatgataactttaaccgaatca
tacatacagatttatgaaagatgtattgattaa
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