Calliphora vicina (urban bluebottle blowfly): 135958226
Help
Entry
135958226 CDS
T10781
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135958226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvj03009
]
135958226
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135958226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_WDR5
UTP15_C
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
WD40_RFWD3
PAC11
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Aladin
DSE1_N
Beta-prop_SCAP
ASA1
Beta-prop_ACSF4
Beta-prop_DCAF4
TRM82_WD
WD40_like
WDR54
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
135958226
NCBI-ProteinID:
XP_065365185
LinkDB
All DBs
Position
4:83377682..83379533
Genome browser
AA seq
526 aa
AA seq
DB search
MYNFKPLNIKKYPKTHQVVTPDTEYWKKLSVPTLVKEFGAIDYVDFSPIEPHYFAVTCSV
RVQIYNPITKLVVKNLSRFQETAYGGTFRQDGRLLVAGDEQGLVKLFDTSSKNVLRLFKG
HKAPVHRVNFTSDLLHIASFSDDKTVKLWDVANEKAIHTFAHHQDYVRAGTVNPVSADVI
VSGGYDGKINLYDTRSNEVTSTVDHGSPVESLLFLPTGGIFISAGGTEIRVWDAFAGCRL
LTKLSQHHKTVTCLRLGSDGKRILSGGLDRHVKIYDVATYQTVHTLNFPNAVLSLGVAPN
DQTVVAGMVDGLVSIQNMEVSRQKEKVQKPRRTHVLAGKAKVEVDHQITYETRHSLQKYD
RHLRRYEYGSCLKSVMTLNVTSKTPEVTVSIMQELIHRKGLHRALAGRSGKSLCLIISFI
CRHIGEHRFMRVLIDVGMALLDVYEDKVHELPGKVAQKFVNLSVALRRQVALTYDLLELE
GSLDMLIAASDVANKQDDMVHFIKDDNTASTLIQSIMAKESSIVTV
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtataattttaaacctttaaatataaaaaaatatcccaaaactcatcaagttgtgaca
cctgatacagaatattggaaaaagctaagcgtacccacgctggtaaaggagtttggagcc
attgactatgtcgattttagtcccatagaaccgcattactttgcagttacctgctccgta
agagtgcagatttacaatcctattacaaagttggtcgtgaagaatttgtcgcgtttccaa
gagacggcttacggtggcacatttcgtcaggatggacgtttattggtagctggtgatgaa
caaggtctggtaaaattgttcgatacctccagcaaaaatgttttgagattgttcaaaggt
cacaaagctcccgtgcatcgagtgaatttcacatcggacttgttgcatatcgctagtttt
tcagatgataaaactgtaaagttgtgggatgttgccaatgaaaaggccatacatacattt
gctcatcaccaggattatgtacgagcaggcacagtaaatccagtttcagctgatgtcatt
gtttcgggaggttacgatggtaaaattaatttgtacgatacacgatcaaatgaagtcaca
tcaactgtagatcatggtagcccagtggagtctttgctctttttaccaactggtggaatc
tttattagtgctggaggaactgaaatacgagtttgggatgcttttgccggatgtcgtttg
cttaccaaactttcacagcatcacaagacggtcacttgtctacgtctgggttcagatggt
aaacgtattctatcaggaggtttagatcgtcatgttaaaatctatgatgtggccacttat
caaactgtgcatacacttaatttccctaatgctgtcctcagtttgggagtggctcccaac
gatcaaaccgtcgtggctggtatggtagatggtttagtttctatacaaaatatggaagta
tcacgtcaaaaggaaaaagttcaaaaacccaggagaactcacgttttggccggtaaagcg
aaagttgaagtagaccatcaaattacctacgaaacgagacatagtttgcaaaaatacgat
agacatttgagacgttatgaatatggcagctgtttaaagagtgtgatgactttgaatgtg
acgagtaaaacgcctgaagtgacggtgagtataatgcaggaacttattcatcgtaaaggc
cttcatcgtgctttggcaggaagaagtggcaaatcgctttgccttatcatttcttttata
tgtcgacatattggagagcatcgttttatgcgagttcttatcgatgtcggcatggcgcta
ttggatgtttacgaagacaaagttcacgagctacccggcaaagtcgctcaaaaatttgta
aatctgtcagtagctttacggagacaggttgcactaacttatgatctattggagttggaa
ggctctttagatatgttaatagctgcttcagatgttgccaacaaacaagatgatatggtg
cactttattaaagacgacaataccgcatcaactcttatacaatccattatggcgaaagaa
tcatccatagttactgtgtag
DBGET
integrated database retrieval system
