Calliphora vicina (urban bluebottle blowfly): 135959620
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Entry
135959620 CDS
T10781
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135959620
Spliceosome [BR:
cvj03041
]
Complex C
Other components
Step II factors
135959620
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
MG4
T2SSE
PhoH
AAA_16
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
135959620
NCBI-ProteinID:
XP_065366675
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All DBs
Position
5:17408027..17410510
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AA seq
753 aa
AA seq
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MNKVDQATIDLDEESGIQARYKDDKEDIEIEIVEEKPPFLSGYDRTLHEFSPVCIVKNPN
GSLAQAAMMQLTLSKERMEQKMLREQNMGLIKTSIDTLPDGDSSHMEVPEWKKYVIGGKK
SSFGKKTDMSLVEQRQSLPIYKMRDDLIKAVADNQILIVIGETGSGKTTQITQYLAECGF
TARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSPETVIKYMTDGMLL
RECLIDNELKGYSVIILGEAHERTIHTDVLFGLQKTAVQKRPELKLIVTSATLDAVKFSE
YFLEAPIFTIPCHTFPVEVLYTKEPETDYLDASLNKVMQIHLKEPPGDILLFLTDQEEID
MACEILYERMKSMGPDVSELIILPVYSALNFEMQTRIFDPTSPDSRKVFIATNIAETSLI
IYGIFYVVDPGFLKQKVYNFKTDMYSLVVTPISQAAAKQRAGRAGYTGPGKCYRLYTERA
YLDEMMPTPVPEIQRTNLATIALQLKALGNNDLMHFDFMDAPPVEALVMALEQLHSLSAL
DDEGLLTRLGRTMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPEDKQNK
AKFNQIEGDHLTLLAVYNSWKDNKFSNAWCNENFVQIKALKHAEDVRKQLLGIMERHKLD
KVSACKNYVPIQKAICSGFFRNAAKKDSHDGYRTLVGSQLVYIHPSSALFNRQPEWVIYH
ELVQTTKCYMREVTTCNPKWLVEFAPSFYRFRI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagttgatcaggctacaatcgatttagatgaagaatctggtatacaggccagg
tataaagatgacaaggaggatatcgaaattgaaatagtggaagaaaagccaccatttttg
tctggttatgacagaactctgcatgaattctcaccggtatgtatagttaaaaatcctaat
ggttcattggcccaagctgctatgatgcaattgactctttcaaaagagcgtatggagcag
aaaatgttacgagaacagaatatgggtcttataaaaacttcgattgacactttgccagat
ggagattccagccacatggaggtgccagaatggaagaaatatgttattggtggtaaaaaa
tcatcctttggcaagaaaactgatatgtctctggtcgaacaacgtcagtctctgcccatc
tataagatgagagatgatctgatcaaagccgtggctgacaatcaaattttgatagttatt
ggtgaaacgggttctggaaaaactacacaaataacacaatatttagcagaatgtggtttt
actgctcggggaaagattggctgtacccaacctaggcgtgtggctgctatgtctgtggcc
aagagagttgccgaagagtttggttgccgcttaggtcaagaagttggctacagtatacgt
tttgaagattgtacaagcccagagacggttataaaatacatgacagatggtatgttgttg
cgagaatgcctcatagacaatgaattaaagggctattcagtcatcatattgggtgaggcc
catgaacgtaccatacacacagatgtattgtttggtctgcaaaaaactgccgtacaaaaa
cggcccgaattgaagcttattgtcacatcggccactttggatgctgtaaagttttcggaa
tatttcttagaggctcccattttcaccataccctgtcacacatttcccgttgaagtgttg
tatactaaagagccggaaactgattatctagatgcttcgttaaataaggtcatgcagata
catttgaaagagccacctggtgatattttgctgttcttgacggatcaagaggaaatcgat
atggcttgtgaaattctatatgaacgcatgaaatctatgggacctgatgtttccgaatta
attatactgcccgtctattctgctctaaactttgaaatgcaaactagaatttttgatccc
acatcaccagacagtcgcaaagtttttatagctacaaatattgcagaaacttcgctaata
atatatggtatattctatgtagtagatccaggatttttgaagcagaaagtttacaatttt
aaaacggacatgtattctttggtggtaacacctatatcacaggccgccgctaaacaacgt
gctggccgcgcaggatatactggaccaggcaaatgttatcgcttgtacaccgaaagagcc
tatctcgacgaaatgatgcccacgccggtgcccgaaattcaacgtacaaatttggcaacc
attgctttgcaattgaaagctttgggtaataatgatttgatgcatttcgatttcatggat
gcccctccggtagaagctttggtaatggctttagaacaattacattccctgtcggcttta
gatgatgaaggtttgcttactcggctgggacgcacaatggctgaattccctctggaacca
aatctgtcaaaaatgttaattatgtcggtggctttacaatgttcggatgaaattttaact
attgtctccatgttgagtgttcaaaatgttttttatcgacccgaagataagcagaacaaa
gccaaattcaatcaaatcgaaggtgatcacttgacactcttggcagtctataacagttgg
aaagataataaattctcaaatgcctggtgcaacgagaactttgtgcagattaaagctctt
aaacatgctgaagatgtgcgcaaacaattgttgggtattatggaaaggcataaactggac
aaggtatcggcctgtaagaattatgtgcccatacaaaaagctatttgttcgggtttcttt
cgtaatgctgccaaaaaagattcccacgatggttatcgtactctagtgggctctcaattg
gtctatatacatccttcaagtgctctctttaatcgtcaacctgaatgggttatttaccac
gaactggtacagacaacaaaatgttatatgcgtgaggtaacaacttgtaatcccaaatgg
ttggtagagttcgccccctccttttatagatttcggatctaa
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