Calliphora vicina (urban bluebottle blowfly): 135959947
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Entry
135959947 CDS
T10781
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03430
Mismatch repair
cvj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135959947 (Pms2)
03460 Fanconi anemia pathway
135959947 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135959947 (Pms2)
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135959947 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135959947
NCBI-ProteinID:
XP_065367172
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Position
5:complement(109462415..109473533)
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AA seq
861 aa
AA seq
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METKEISVPEGTKEESKSIKAINKDTVHKICSGQVVLSLAVAVKELVENAIDAGATLVEV
KLRDQGLESVEVSDNGCGVEENNLEGMTAKYHTSKLREFVDLQSVETFGFRGEALSSLCA
LANMSITTRHKSTDVAIKIDLDHEGKIRKRQPCARSIGTTVTLTSLFETLPVRRRDFVRN
IKKEFTKMCQILQAYCLVSRGVRIICSNQTLKGSKTVVVQTHGSQDILANISAIFGSRQV
NDILQLKCPLKDSEGVAIPANLLMEQLQNDIGGSIRLTKDDIIQLYDSQFKLEGYISSCE
HGSGRSSKDRQYFYVNSRPCDPKNISKVVNDCYHRYNVNQYPFIYLNIITDRQSVDVNLT
PDKRQLLLNNEKILLALIKKALITTFGNIPSTFKMQNTTLFSIMGVDKANKSSKQTENVQ
NEIEEDVPLTSTQKFMDVLTQWKQTGDTVGPVTQSKPKKRKYADEITTRTLKLQKIQDFL
TTNAVCSSTNSYQEHSYKSEPDSEEESEVKNKEDKSHDISKPNIEVLSKESLEYDELMTK
TSPQYVVERIDCKNLTPLKTRPVKLEIPEETTLSPDDLNDNIELDESDSEAEYRNQPCSE
LKLSLAEITLNLEAEENLINDRQRKAKLERLRFKSEINPNQNKKAEAELQKEITKNCFDK
MEILGQFNLGFIIAKLDTDLFIVDQHATDEKYNFETLQNTVQLQHQPLAVPQPLDLTAVN
EMVLIDHLSIFEKNGFKFEIDNNAPPTKKIRLLGKPFSKNWEFGKEDIDELIFMLQDAPE
GTMCRPSRIRAMFASRACRKSVMIGKSLKKSTMKLLVKHMGEIEQPWNCPHGRPTMRHLI
NTAMLINDDEEEDQDQNASAQ
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaaagaaatttcagtaccagaagggacaaaggaagaatcaaaatctataaaa
gccatcaacaaggatacggtgcataaaatatgttcgggccaagtggttttaagtttggcc
gtagcggttaaggaattagtagaaaatgctatagatgcaggagccaccttagtggaagtt
aaattacgtgatcaaggtttggaatccgttgaagttagtgacaatggttgcggtgtggag
gaaaataatcttgaaggaatgaccgccaaatatcacacctcgaagctaagagaatttgta
gacctacaatcagtggaaacatttggttttcgaggtgaagctttaagttccttatgtgca
ttggcaaacatgtcgataacaacacgccacaagtctacggatgtggccattaaaatagat
ttagatcatgagggtaaaattcgaaaaagacagccttgtgcccgtagcattggaacaacc
gtaacacttacaagtctgtttgaaacattacctgtgcgtagaagggattttgtgcgtaat
ataaaaaaggaatttacaaaaatgtgtcaaatactgcaagcgtattgtcttgtgtcccgt
ggtgtacgtattatatgtagtaaccaaactttaaaaggatccaagactgtggtagtgcaa
actcatggatctcaagatattttggccaatatttctgccatatttggtagtcgtcaggtg
aatgacattttacaacttaaatgtcccctaaaagacagcgaaggtgtagccataccagct
aatttattaatggaacaattgcaaaatgacataggtggtagtattcgtttgaccaaagat
gatattatacagctgtatgattcgcagttcaaacttgagggttatatctctagttgtgaa
catggcagtggacgctcttccaaagatagacagtatttttatgtcaattccagaccttgt
gatcccaaaaatatatcaaaagtcgtcaatgactgctatcatcgctataatgtcaatcag
tatccctttatttatctcaatattataacagatcgccagtcggtagatgtcaatttaaca
ccagacaaacgtcaacttttgctcaacaacgagaagatacttttagcccttatcaagaaa
gcattaatcacaacatttggcaatataccttcgacatttaaaatgcaaaacactacctta
ttcagcataatgggagtggataaagctaacaaaagttccaaacaaacagagaatgtacag
aatgaaattgaagaggatgttcccctgacatctacacaaaaatttatggacgttttaacg
cagtggaagcaaacgggggatactgtaggtccagtgactcaatctaaaccgaaaaaaaga
aaatatgctgatgaaataacaaccagaacgttaaaattgcaaaaaatacaagattttctt
accactaatgctgtgtgttccagtaccaatagttatcaagagcacagttataaatcagaa
ccggatagcgaggaagaaagtgaagtgaagaataaagaagacaaaagtcacgacattagt
aagccaaatattgaagtcttatcaaaagaatcccttgaatatgatgaactaatgacaaaa
acatcacctcaatatgttgtagagcgtattgactgcaaaaatttaacacccttgaaaact
agaccagtcaaattggagattccagaagaaacaacattatcacccgatgatctcaatgac
aacatagaactagatgaaagcgattcagaagctgagtatagaaatcaaccatgtagtgaa
ttgaaattatccttggcggaaataacactgaatctagaggcggaggaaaatttaataaat
gaccggcagcgtaaagccaaattagaacgtttacgttttaagagcgaaataaatccaaat
caaaacaagaaagctgaggccgaattacaaaaggaaatcacgaagaactgttttgacaaa
atggaaatactgggacaatttaatttgggttttattatagctaaactagacactgacctc
tttatagtcgatcaacatgctaccgatgagaagtacaattttgaaactctgcagaatacg
gtacaattacaacatcaaccactggcagtgcctcagccactggacttaaccgctgtcaat
gaaatggtgttaatcgatcatttgtcaatatttgagaagaatggctttaaattcgagatt
gataataatgctcctcccaccaaaaaaatacgtttgctgggcaaacctttcagtaaaaat
tgggagtttggtaaggaggacatagatgaattaatttttatgctacaggacgcacctgaa
ggtacaatgtgtcggccatcgcgcattagagctatgtttgcttctagagcttgccgcaaa
tcggttatgattggtaaatctttaaaaaagtccaccatgaaattgttggtcaaacacatg
ggtgaaatcgagcaaccttggaattgtcctcatggccgtccaaccatgcgtcacctcatt
aacacagccatgctgataaatgatgatgaggaggaggatcaagatcaaaatgccagcgca
caataa
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