Calliphora vicina (urban bluebottle blowfly): 135960161
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Entry
135960161 CDS
T10781
Name
(RefSeq) uncharacterized protein LOC135960161
KO
K19026
spatacsin
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Brite
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135960161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
135960161
NCBI-ProteinID:
XP_065367464
LinkDB
All DBs
Position
1:complement(48619634..48638543)
Genome browser
AA seq
1877 aa
AA seq
DB search
MANNERDKIFKSWSGISEVALIKEVATKGEHIQLCIQYWARKRKMSVTEYELFFHDVVQT
YVNRLLTERLVCKAENVLRNVQRDVKCFYYQFACESNDPELRELIMEHLIKKEPCDDYEH
HMQNLKFHWELLQQIKKSETIMANIKKHMRRVNLESLMALDSATQQRLMIELYFETHNQV
LLQHINKFVMWDYLIDTKQIEEIIRWCRIQHTSKDHKPCIAGLSELESKYFQWTLESEMY
KYALRSLQDNSDSVLRNYFASAGYFFEDEIHSVPAVLQRICLTESFDQNNDNIKGLPLAR
FMFDHKFYYLLLYDFVGTRQLEELSELLSEHRPLLKFLVVLKTNSFQDLEGFKEISFYAT
KYLESVGVDFEQEQALATLFEFLTTEPSMSNLQCSATSGTLKTLTYLKIIHHQQQNETTN
TIEHGLPNVYDLLKTFKELDFKRLTKDANVYGKCSRFSEQPKQDGKTILQYTFRLNFLHY
IKQSRCAYAVYLMLLEQLQNYAQITETHLFSACECVYDMALQSSSTDTEVITHSIAFCEM
LGFDTQQLRCFLKLKKYLTNGVDSQHSQNIVSILQKSERILIQRLENECIFPLNEYTAIM
YINGIARSVNNTSNDHVSLVMQHYATLNDYWRLLVLLQYFEISLDQIKNLVKYFTILPMG
DHLLRALAFATQINERSTGLKRRTSLTRRQLKQNKQRRKENKTAVTTTSMETMTSSFASC
HESSGIANDLEPNNDRFVADCINGGPDLFALIILYTNATKGNDIEKIDDLNKFLECMQQK
QNRATTSTVVNYLRTAVEQHLPIMAVLAASINGKDDCNLDWCWLVWLSVTTNQWSNVLRL
AVGINIHSFPWNLIENLVRQCQIKSLVRSFSIFYPHNALLHLFNFLELTLQSEFGDKAVH
ELHLYALAWSNDDVRLPLNPWSKREKLMKRTIWLLLSHLKNNFESITDQMKFLTCVCQSG
LSDITAQLDFCLLRGFCEILQLAGNGATQRFPLNFIELIQNESGENKEYERILNCVLAAK
EYDIAVRLASLLHKPISDIVYSKWVNSLELQLALPTVENFDNYKFPFEQYEQEVSTHSLP
PETLVNFLLYASSRLPSKSFRSRFYVLQKALNVIKHHHLFPNESFDRDQIEYDMIINYLL
LEDEDVSTLTLYHSEYYEEIMLSERCVLYKSFLELKELAGIEDLNISSKIDLDERQKSKL
ESLLHHLLDDGDIVEALRLQELFDVRPLDLRFVVFCMALAESMSNIYAMSADERQLLAEI
ERSSFSKFTKRTLCATTGGSGSYLSDSSSTLEFEEIPSKEKQETLAILQGIASKLKFGVT
IAKRVICCYRAAMYLDKEYLDVLRTKDVQILLQSIAEEICLHRLLVVSDILTSTHMEPQE
IAELLAFEITTAVVRPRFYIFSPDQQAKHMFRNADLWGYNIDRDLHLFLELTPDRTKLGA
CLLEYCDALKLYRKYQDNKPYEQNIYFERLAEIIAQYGQPNNSSTGNANNNLNNNDANQA
ARPLQVLSHKKQNIIYVELLIKAHQAFVHECSMEGIANVLNRAKVLNSILAQAKSWSLIV
RMLIGIGRYREMFFCFDTLIENEQFESLLGQFDIEKTIGLRQAILAYLREYCAPQQGKEL
FKLAALNFLMYKDLAELWEQDAAEILNKVYNTFHLPDDTDGKLSKLKCSAEMVNQLNLSL
EYYVHATENYLLDNKLLLAQKSASLAELTAMQIDLASTALEKPATSSGLHLCICVINVKT
REQFKILVNNELSVSQTLILSRAYGYDINWSEAIIYQYVIKLKRSYMNDFLQQVDITDDI
IENAIKCFQLQCNQNTISKEMEEHISELVNLVQSVTLKYKLASLLTLKTTILSLINDQTI
HYLRDMKFGRREENRNA
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataatgaacgtgataaaatttttaaatcatggtctggaattagtgaagtcgct
cttattaaggaggtggctacaaagggagaacatattcaattatgcatacaatattgggct
cgaaaacgaaaaatgtctgtgacagagtatgagctgttcttccatgatgttgtacaaacc
tacgtgaatcgtttgttaacagaacgtttggtgtgtaaggccgaaaatgtcctacgcaat
gtacaacgagatgttaaatgtttttactatcagtttgcatgtgaatccaatgatccggaa
ttacgagaactaataatggagcatttgattaaaaaagagccctgcgatgactacgaacat
catatgcaaaatttaaaatttcattgggagctgctgcagcaaataaaaaaatccgaaacc
atcatggcaaacataaaaaaacatatgagacgtgtgaatttggaatctttaatggccttg
gattctgctactcagcaaagacttatgatagagttatattttgagacacataatcaagtt
cttctacaacatattaacaaatttgttatgtgggattatttaattgataccaaacaaatc
gaagaaatcatacgatggtgtagaattcagcatacctcaaaggaccacaaaccatgtatt
gcaggtctttccgaattagaatcgaagtactttcaatggactcttgaaagtgaaatgtat
aaatacgcattacgttctctgcaagataacagcgacagtgtcctacgaaattatttcgct
tcagctgggtatttcttcgaagacgaaatacattctgtaccagctgtgttgcaacgaatc
tgtctcacagaaagttttgaccaaaataacgataatataaagggtttgccattggcacgt
tttatgtttgatcataagttttactatttgctattatacgactttgtgggaacacgtcaa
ctcgaagagctgtctgaactgttaagcgaacacagacctcttttaaaatttttagttgta
ttgaaaactaattcttttcaggatctagaaggtttcaaggagataagcttttatgcgaca
aaatatttggagagcgttggcgtagattttgaacaagagcaagcactggcaacacttttt
gagtttcttaccacagagccatccatgtcgaatttacaatgttccgccacttcaggcaca
ctcaagactctgacctatcttaagattattcatcaccagcaacaaaatgaaacaacaaat
acaattgaacatggcctgccaaatgtttatgatctattgaaaacctttaaggaactggat
tttaaacgcttaacaaaggatgcaaacgtatatggaaaatgttctagattttcggaacaa
ccaaaacaagatggtaaaaccatactacagtacacatttcgcttaaactttttacactac
atcaaacagtcgcgttgtgcgtatgctgtttacctgatgctattggaacaattgcaaaac
tatgcccaaattacggagacccacttattcagcgcatgtgaatgtgtctacgacatggca
ctgcaatcatcctcaacggatacagaagttattacgcacagcatagcattttgtgaaatg
ctgggttttgatacgcaacaattgcgttgctttctaaaactaaagaaatatctaacaaac
ggtgtggatagccagcattctcaaaatatagtttctatactgcaaaaatctgagcgtatt
ttaatccaacgtttagaaaacgaatgtatatttcctttaaatgaatatactgccataatg
tatattaatggtatagcaagaagcgttaataataccagcaatgatcacgtctcccttgta
atgcagcactatgccacacttaatgattactggcggctgttagtgctattgcaatatttt
gaaatatctttagatcaaatcaagaatttggtaaaatatttcaccatacttccaatggga
gatcatctgctacgagcattggcatttgcaacacaaataaacgagcgtagtacagggctt
aaacgtcgcacaagtctaacccggcgtcaactaaaacaaaataagcaacgtagaaaggaa
aataaaacagctgttactaccacctccatggaaaccatgacatcgtcgtttgcttcttgc
catgaatcatcgggtattgccaatgatctggaaccgaacaatgatcgatttgtggcggat
tgtataaatggtggccccgatctgtttgctctgattatactgtatacaaatgctaccaaa
ggcaatgacattgaaaaaatagacgacctcaataagttcctcgaatgtatgcaacaaaaa
caaaatcgtgcaaccacgtcaactgttgtcaactatttaaggacagctgttgaacaacat
ttgcccataatggctgttttagcagcctcaataaatggcaaagatgactgtaatctagat
tggtgctggctggtgtggttatccgtgactacgaaccaatggagtaatgttttaagattg
gccgttggcattaatatacactcatttccctggaatcttatagaaaacttagtaagacag
tgtcaaattaaatcgttggtgcgaagcttttctatattttatcctcataacgccttgcta
catctattcaattttctggaactaactttacaaagcgaatttggtgacaaagccgtccac
gagttacatctgtatgctttggcttggagtaatgatgatgtacgtttaccactgaatccc
tggtcaaagcgtgaaaaacttatgaaacgaacaatatggcttcttctatcacatttgaaa
aataattttgaatcaattactgatcaaatgaaattccttacctgtgtctgccaatctggg
ctgagtgatataacggcacagctggacttttgtttgttaagaggattttgtgaaattctg
caattggctggcaatggagccacgcaaagatttcccctgaactttatagagctgatacag
aacgagtcgggcgagaacaaggagtatgaacgaattttaaactgtgttttggcagccaaa
gaatatgacattgctgtacgtttggcctcacttttacacaagcctatcagtgatattgtc
tatagcaaatgggtaaactctttagaacttcaattggctttgcccacagtggagaatttt
gataactataagtttccctttgagcagtacgaacaagaggtttctacgcactccttgccg
ccagagacccttgtgaactttctattgtacgcctcctcccgtttgccctcgaaatctttc
cgatctcgcttctatgtgctacaaaaagcactaaatgttataaagcatcatcacttgttt
ccgaacgaatcatttgatcgcgatcaaattgaatatgacatgataataaactatcttctg
ctagaagatgaagatgtgtccaccctcacattgtatcattccgaatattacgaagaaata
atgttatctgaaagatgtgtgctctacaaatcatttcttgaacttaaggagttggctggc
atagaagatttgaatataagcagcaaaatcgatttagatgaaagacagaaaagtaagttg
gaatctttattgcatcatttgctggatgatggcgatattgttgaagctttacggttgcaa
gaactctttgatgtgcgacccttggacttgcgttttgtggtattttgtatggctttggcg
gaatctatgtccaacatatacgcaatgtcggcagatgaacgtcagctgttagctgagatt
gaacgttcctcgttttccaaatttactaaacgcacactttgcgccacaaccggtggtagt
ggtagttatttatcggacagcagttcaaccttagaattcgaagaaataccctcgaaagaa
aaacaagaaactttggccatacttcaaggcattgcttcgaaattaaagtttggtgtcacc
attgccaaacgagttatctgttgttatcgtgctgccatgtacttagacaaagagtattta
gatgttttacgcacaaaagatgtgcagatattgttgcagagtatagcagaagagatttgt
ttgcatcgtcttttggtagtgagtgacatattgacgtcaactcatatggaaccacaagaa
attgccgagctattggcctttgaaatcaccaccgccgttgtacgaccacgtttctacatt
ttcagtcctgaccaacaggctaaacatatgtttcgtaacgcagatctctggggttataac
attgatagggatttacatttattcctggaactaacgcccgatcgtactaagctaggcgca
tgcctgttagagtattgtgatgctctaaagctgtatcgtaaatatcaggataacaagcca
tacgaacaaaatatatactttgaacgtttagccgaaattatagcacaatatggccaacca
aataacagcagcactggaaatgccaataataatttaaataataatgatgcaaatcaagcg
gcgcgacctctacaagttctatcacataaaaaacaaaacattatttatgttgaacttttg
atcaaagcccatcaggcttttgtacacgagtgctccatggagggcatagcaaatgtacta
aatcgagccaaagttttaaactcaatacttgcccaagccaaatcttggtccttaatagtg
cgaatgctaataggcattggacgctatcgcgaaatgttcttttgttttgataccctaatt
gaaaatgaacaatttgaatctttgctgggacaatttgatatcgagaagactataggattg
agacaagccattttagcttatctacgcgaatattgtgctccccagcagggaaaggaactt
ttcaagctagctgctctaaattttttgatgtacaaagacttggctgaattatgggaacag
gatgccgcagaaatactaaataaagtatataatacttttcacttgcctgacgatactgat
ggcaaattatcgaaactaaaatgtagtgcagaaatggttaatcaactcaatctttcgctg
gagtattatgtacatgctaccgaaaactatttactggacaataaactattgctggcccag
aaaagtgcatcgctagctgaactaacagccatgcaaattgatttagctagtacagcatta
gaaaaaccagctacatcaagtggtctgcatctatgtatctgtgtgataaatgttaaaacg
agggaacagtttaaaattttagtcaacaacgaattaagcgtatctcaaacattaatacta
agtagagcgtatggatacgacatcaactggtctgaagctattatatatcaatatgttatt
aagttgaaacgttcatatatgaacgatttcttgcaacaggtggatattacagatgatatt
attgaaaatgcaataaaatgttttcaacttcaatgtaatcaaaatacaataagcaaagaa
atggaagaacatataagtgaacttgttaatctggtgcaatcagttacactcaagtataag
ttggcgtctctattgaccctgaaaacgacaatattatcgttaattaatgatcaaacaatc
cactatctaagagatatgaaatttggtcgcagagaagaaaatcgaaatgcctaa
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integrated database retrieval system
