Calliphora vicina (urban bluebottle blowfly): 135961097
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Entry
135961097 CDS
T10781
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135961097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvj03009
]
135961097
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135961097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Utp13
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_NUP159_NUP214
RMC1_N
eIF2A
WD_LRWD1
Beta-prop_IFT122_2nd
Beta-prop_IFT140_2nd
VPS8_N
Motif
Other DBs
NCBI-GeneID:
135961097
NCBI-ProteinID:
XP_065368658
LinkDB
All DBs
Position
5:25313588..25316139
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AA seq
789 aa
AA seq
DB search
MSLNISEKSYAVEARYANFYAGGDVAWSKDGKWIYCLNGSEVTKVEVENGLVSRSYGLNY
NEQGEKISSEEEEETDDQIYCFDLSPTQEYMVTVHRSSLLRLWHLSSGKVEKLWKSQHRG
PVVKVVFNADGRLVCTSGADSTLRVWDYENSRCLAVLKDFTGPSVLLQFHPNTSKLEIFA
AGSDNCIYKWNYETKTVEAKMKGHLSQVTGFAFADQTADCEFVASASRDKVLIVWRLQDG
KQMKVIPMYEELVGVVYKDNETIIVAGAKGNLKQISSKTSKISTLLECQEEEYQITTLMI
NITNKQLAFVTADHNILIFDIKSKDKVDSFKQLIGFNDEILDVCFLGESEEFLAMATNSK
HIKLYDIGNHMNCNIVTGHKDTVMSLSTPGSSKLLLSAGKDFTICLWQLDNENANLICLA
KHINSHTATIGCISFAYHCDNAFASVCQSGSLKVWTLKGKSKQNDDYQFSVKYAAAAHDK
EVNCVAFSPNNKIIATASQDKTAKLWSADSHSILGSLKGHTRGVWCVRFSPTDQILLTTS
SDCSLRLWSLSNLTCLKRLEQSATVLRAEFIDHGKYILSSGSDGLLKLWNIKTNTCIQTL
DEHDDRVWSLAVSSKTQKYFFSAAADSKLIKWRDVTEECKNTEIDNRQEMLQQEQALQLL
LHQNNQLKKAFKLALKLGKPKVSYNILNQYVRRRDFKAIEEMISNLNNDQKITLLDHVKV
WSCNSRHSQVSSLVLQQLLAEMLVEPKMQRTLNSKNLVEVVTPYVQRHFKRITELSKELN
FLDFIVESI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaaacattagtgaaaagagttatgctgtggaagcacgttatgccaatttctat
gctggtggcgatgtagcctggagtaaagatggcaaatggatttattgcttaaatggcagc
gaagtgacaaaagttgaagtggaaaatggtttagtatcacgctcctatggcttaaattac
aatgaacagggcgagaaaatttccagtgaagaggaggaagaaactgatgatcaaatttat
tgttttgatttatcgccaacccaagaatatatggttacggtgcaccgtagcagcttgtta
agactgtggcatttgtcttcaggaaaagtggagaagttgtggaaaagtcaacatcgtggt
ccagttgttaaagttgtatttaatgcggacggacgcttggtatgtactagtggagccgat
tcaactttgagagtctgggattacgaaaacagtagatgcttggcggttttaaaagatttc
accggaccttcggtactattgcaattccatcctaatacctcaaaattggaaatatttgct
gctggttcagataattgcatatataaatggaattatgagaccaaaacagtggaagccaaa
atgaaaggacatttatcacaagtaacaggctttgcttttgccgatcaaacagccgattgt
gaatttgtagccagcgccagtcgtgacaaagtattgatagtttggcgcttgcaggatggc
aaacaaatgaaagtaatacccatgtatgaagagttggtgggagtagtatacaaagataac
gaaacaattatagtggcaggagctaagggcaatttaaaacagatttccagcaaaaccagt
aaaatatctacccttttagagtgccaagaggaagagtaccaaatcaccacgttaatgatt
aatatcactaacaagcagttggcatttgtcaccgcagaccataacatattaatttttgat
ataaagtccaaagacaaagtggacagttttaagcaattgataggtttcaatgatgaaatt
cttgatgtatgttttctgggagaatctgaagagtttctggccatggccaccaatagcaaa
catataaagttatacgatataggcaaccatatgaattgtaatattgtaacgggtcacaag
gataccgtaatgtcactgtccacacccggttccagtaaattgctattatcggctggcaaa
gatttcaccatatgtctgtggcaattggacaatgaaaatgccaatttaatatgcttggcc
aaacatataaatagccatacagctaccataggctgcataagttttgcttaccactgcgac
aatgcctttgcctcggtttgccagagtggcagcttaaaggtgtggactttgaaaggcaaa
tcaaaacaaaatgacgattatcaattttcggtgaaatatgctgctgctgctcatgacaaa
gaagtcaactgtgttgcattttctcccaataacaagatcatagctacagcatctcaagat
aaaactgccaaattatggtcagccgatagccacagcattttgggctctttgaagggccat
acacgcggtgtttggtgtgttcgtttctcgcccaccgatcaaattctcttgactacttca
tctgattgcagcttacgtctgtggtcattatccaatcttacttgtcttaagcgtctagag
caatcagccaccgtattgagagccgaatttatagatcatggcaaatatattctatcctcc
ggttcggatggtcttctcaaactctggaacatcaaaaccaacacctgcatacaaaccttg
gatgagcatgacgatcgtgtttggtctttagccgtttcctcaaaaacacaaaaatatttc
ttcagtgccgccgccgattctaaacttatcaaatggagggacgtaacagaagaatgtaaa
aatactgaaattgataaccgccaagaaatgctgcagcaagaacaagctttgcagctgcta
ctacatcaaaataatcaattgaaaaaggcttttaaattggctcttaaattaggtaaacct
aaagtttcctacaatatactaaatcagtatgtcagacgacgtgattttaaggcaatagaa
gaaatgatatccaatttaaataatgatcaaaagataacgctcttggatcatgttaaggtg
tggagttgtaattcccgccactcacaggtctccagtttggtattgcagcaattgttagcg
gaaatgttggtggaaccaaaaatgcaacgcactttaaattccaaaaatctggttgaagtt
gttacaccctatgtgcagcgtcattttaaacgtattacagaattaagtaaagaattaaat
tttttggattttattgttgagagtatataa
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