Calliphora vicina (urban bluebottle blowfly): 135961762
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Entry
135961762 CDS
T10781
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135961762
09123 Folding, sorting and degradation
03018 RNA degradation
135961762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135961762
03041 Spliceosome [BR:
cvj03041
]
135961762
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135961762
mRNA degradation factors
5'-3' decay
Lsm complex
135961762
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135961762
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
135961762
NCBI-ProteinID:
XP_065369412
LinkDB
All DBs
Position
5
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AA seq
96 aa
AA seq
DB search
MASALEQYINHTVSIITADGRNFIGTLKGFDQTINVILDESHERVFSPTAGIEQIVLGLH
IIRGDNIAVIGQIDETIDSRLDFPNIRGEPLGPVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagctctagaacaatatattaatcacacagtatcgattataacagcagatgga
cgcaatttcattggaacacttaagggattcgatcaaaccatcaatgtgattctggatgaa
tctcatgaacgagtcttttcaccaacagccggcattgaacaaatcgtattgggtttgcat
ataatacgtggagacaacatagcagtgataggacaaattgatgagaccatcgattcaagg
ctagactttcccaatataagaggtgaacccttgggaccagtggtacattga
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