Calliphora vicina (urban bluebottle blowfly): 135962143
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Entry
135962143 CDS
T10781
Symbol
MED31
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135962143 (MED31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135962143 (MED31)
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135962143 (MED31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H_2
T5orf172
DCC1-like
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
135962143
NCBI-ProteinID:
XP_065369984
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All DBs
Position
1:54649972..54654086
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AA seq
317 aa
AA seq
DB search
MTSSQQLTKTAPVEQMKSRFYGVYLLCSQSPEKRYNGKCYIGFTVNPTRRIKQHNRGKDF
GGAKKTSNKGPWKMVMVVHGFPNNIAALQFEWAWQQPTLSSRLKVYPELKRKLPKETYFQ
YNFRILSRMLNVGPWQRLPLVVRWLETDYECEFDALFAPPKHMKIVNGSVALEKPQKKKQ
QTTLPRAIWAPECHLCMQTIQNVEQSRIGCLNSLCKLTCHIICLANHMLSSDPSQRGHYI
PIAGECPLCETSLLWIELLQRKRKMQGVLMEEDEDEDCQDDEEESDEDEELNNISFTQIE
ENMEEPSELMDIYELSD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtctcaacaattaacaaaaactgcacccgtcgaacaaatgaaatcacgtttc
tatggtgtatatttgttatgcagtcaaagccctgaaaagcgatataatggtaaatgttac
ataggttttactgtaaatccgacacgtagaataaaacaacataatcgtggcaaggacttc
ggaggggctaagaaaactagtaacaaaggtccctggaaaatggtcatggtagtgcatggt
ttcccaaacaatatagccgcgctacaatttgaatgggcttggcagcagcctacactatcc
tcacgactaaaggtatacccagagttgaagagaaagttgccaaaggaaacatattttcag
tataattttcgaatattaagtcgcatgttgaatgtgggtccttggcaaagactaccttta
gtggtacgttggttagaaaccgattatgaatgtgaatttgatgccttatttgctccacca
aaacatatgaaaattgttaatggctctgttgctcttgaaaagccacagaaaaagaaacag
caaactacattgcctcgtgccatatgggcaccagaatgtcatctttgcatgcaaacaata
cagaatgttgaacagtcacgtattggctgcttgaatagcctgtgtaaattaacttgtcat
ataatatgtttagctaatcatatgttgtcgtctgatccatctcagagaggtcattacata
cccatagccggcgaatgtccattgtgcgaaacatccttgttgtggattgaattattgcag
agaaaacgtaaaatgcaaggtgtattaatggaagaggatgaagatgaggattgccaagat
gacgaggaagagagcgacgaagatgaggaactaaataatataagttttacccaaattgag
gaaaatatggaggaaccttcagaattaatggatatttatgaacttagtgattga
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