KEGG   Calliphora vicina (urban bluebottle blowfly): 135963190
Entry
135963190         CDS       T10781                                 
Symbol
Pnn
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
cvj  Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013  Nucleocytoplasmic transport
cvj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135963190 (Pnn)
   03015 mRNA surveillance pathway
    135963190 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvj03019]
    135963190 (Pnn)
   03041 Spliceosome [BR:cvj03041]
    135963190 (Pnn)
Messenger RNA biogenesis [BR:cvj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135963190 (Pnn)
Spliceosome [BR:cvj03041]
 Complex C
  Other components
   EJC/TREX
    135963190 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_memA RSB_motif Pinin_SDK_N Polyoma_agno
Other DBs
NCBI-GeneID: 135963190
NCBI-ProteinID: XP_065371033
LinkDB
Position
1:70777630..70864084
AA seq 338 aa
MCTDYIQSYNDLQQELENAKDTLVVLNDNIKRIIGRGPKLARDTRSNEIKRCDDDKAIKH
FQDSSGSKKRANNSKSVFKRLSSPTARYNNSELRPRLTSRVIRELPSRQEIVAAQCADSE
SRARNRRMFGSLLGTLHKFCQEESRLKQKEEKKAQIEKKLEEQEILEKESIKRERETLFV
DRKRKQMEIKRLESKMSRIKDYEIWENSMKGLKTFIKTKTTPCIYYRPKVLTNKTEKLLA
ESLYDIDAIINKKKEDLKLNLIKLEENLQIPEYDTGEDANMSSDKIDDDFDNSSVTANAI
ASSICVIKDKKCDPDSKENKIRYTEEPMLSSSVVIINN
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgtgcacagactatattcaaagttataacgatcttcaacaagaattggagaatgcaaaa
gacacattggtagttctaaatgataacatcaagcggattattggacgcggtcccaaattg
gccagagatactagatcaaatgaaataaaacgttgtgatgatgataaggccattaaacat
tttcaggactcatctggttcaaagaaaagagcaaataattcgaagtctgtttttaaacga
ttatcatccccaaccgcaagatacaataattcagaattaaggccaagactaacgtcacgg
gttattagagaattaccatcacgacaagaaattgttgcagcacagtgtgcagattctgaa
tctagagcaagaaaccgccgtatgtttggatcccttttgggcactttacataaattttgc
caagaagagtctcgtctgaagcaaaaagaagaaaaaaaagcacaaattgaaaaaaaatta
gaagagcaagaaattctggaaaaagaatcgattaaaagagaacgtgaaacattattcgtt
gacagaaaacgcaaacaaatggaaataaaaagattggagtcaaaaatgagtcgtataaaa
gactatgaaatttgggaaaattctatgaaaggcttaaaaacctttattaaaactaaaact
actccatgtatatactatcgaccaaaggtgttgacgaataaaaccgaaaaattgttagct
gaaagtttatatgatattgatgcaattattaataaaaagaaagaagatctgaagttaaat
ttaataaaattagaagaaaatttacaaattccggaatatgataccggcgaggatgcgaac
atgtcatctgataagatagacgatgattttgataactcctcagtaacagctaatgcaata
gcatcttcaatttgtgttattaaggacaaaaaatgtgaccccgactcgaaggaaaataaa
attagatacacagaagaaccaatgttaagtagcagtgttgtcattataaataattga

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