Calliphora vicina (urban bluebottle blowfly): 135963480
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Entry
135963480 CDS
T10781
Symbol
sima
Name
(RefSeq) protein similar isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj04137
Mitophagy - animal
cvj04140
Autophagy - animal
cvj04148
Efferocytosis
Brite
Transcription factors [BR:
cvj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135963480 (sima)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135963480
NCBI-ProteinID:
XP_065371411
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Position
1:103551103..103832234
Genome browser
AA seq
1954 aa
AA seq
DB search
MFSSCSEWNNKFIPQTDQSEFYDEVYNDCNASASGGCGDGTGGCGELPLQPQQPQQYATS
NQFYETSSLSSVNNYNNFTTTNEESVNFNNNYNNNHTTALQCQMNSNANNANSLNFNQNN
QSAFQNNHNNNNNYMNPLTPTFAHAQDTNIPQQFQQQQQQQFAYQRSNLINNQQNHNNFF
NSSQQPQQQPQQQQLVLYNSNAPQQPVVTQQYNFQPPPPSRMLNNYYNLHHNRQPQLHHQ
QYQLQQQQQLNQQSLVTPCAPSIPCQGNQPWTYAYCYGYGPYSNQEPCQFTQVVDIEDFM
NNEKRKERSRDAARCRRSRETEIFTELAEVLPLKKEDVQQLDKASVMRVAIAYLKVRDML
KMFPKIQELLGDLQLCGDNNSSIENSEANDDTSAFNSSLDSHDSSTQSSQASEDSNQQSA
IESSKTLESSTLTATNGDSAGVDDFSLLLKQTMDGFLLILSNDGDITYVTNNISDYLGLS
KIDLLGQQIWEYAHQCDHAELKEALNLKRNGLTNKVKDENLLEEGISTDHRDLFVRLKCT
ITSRGRSINIKSASYKVIHITGHLVVNTKGDRVLVAMGRPIPHPSNIEVPLGTSTFLTKH
SLDMKFTYVDDKMYNLLGYKPEDLLETSLFNCHHGIDTDSLMTTFKNVLSKGQGETCRYR
FLGKYGGYCWIVTQATIVYDKLKPQSVVCVNFVISNLEKKHEIYTLQQYEESQKFKLEEN
NNNKTQGLNENKHQEELINKDQQLKEEKLFAATELQKPLEAAITKIETSTPPATPLNNNN
NINNNNNQKIKEDLINIKQEHIPPIAINNNKNKTLIETSPSTTATTPVVAPLKPPTQQPQ
LPLHCPTTTVTHTIFNKSIISAPKFSAEDKRPKTVTSSLILTNLPTTTSTQSILQHPPLN
VVATRAPQSVTASVFSPLPPSPPSPPKLPSSTATAAILALQQSEGGPHSVNANHPQDMNK
GYLTFAEDATELTMLKEEPDDLTAHLVATNAVDACMPLDESGPLFGEILVGFGMGSYGSL
LPDDINSLDSNTSSTEHSNNNHNNNSNNQTTIKSAGNTCSSSSASPTSSSTTSSYNASIL
AATTSTHNHRQSSPSSMITTTTCATNNNTITTTAATTNSTNIDPFINYRDESNDTNCSQH
LLSPSVTSKSPEGSSLPSLCSPNSLSQEDEFSYYTMNVDDMDDLTMRAPYIPMNEQDDLP
LLTSDDYMWSSGNAFTPDEFSLNTKDSDNLQALQINQTLNYQQQQFTQQQQQQQQTQQFS
NSLCSSPASTVSSMSPSPIQQQQHLQQQQNSQQIFSADSSELAALLCGSGSGSLSILQDA
TNFTNSLNLNGGSATTLVAAGGNSGSNQSNISVENSVGLTDDLDSVSVASSSTTPTLDHH
QQLQQHCLQQFQEQLQQQRQQQQLLSGLNINCKKEKFESANNSPSLSSNLCDSIEDTFDN
VYSKNSTNLDCWNEFLQINTNENTNTTNNNNAAATTVLANLRQEDCKQQLHMQLQQQQQQ
QQTQNIIINAVPLITIQTTSNNKNVLIQQQQQQQQLSQHHHQQQQQQQQQSNTKSLNKVN
TVKLTPITSTATIKIIENKQPLLQQQQHNIIKTAYIQAAPTTTPAVTALHNSNNKRHLSN
NLIANNALESKRLKSNIMDLQNSTTTSQLLQQLITTPQQQQPGNLNAKNSKGGLESRWSS
NENQALSQQQQQQQQQKQQKQSNSVLKNLLISGCDKTKLPKPEIITIEDGSRSSMQSPDL
CVSPSLTRPLQCMTSPATVLRNYRHNPWIGGPGVLPSPTTSLITNDDSNPPGLSPCDAID
SASDSGIDDISVAENMSPLKRPYQQQQMTAATVIVNNNNNKIIDIDNNIIKLANNNKINE
NIKSTIAPITTTTVTSAVLMQGAELAKKLLEDTEEDGATMCKRKRSISYIDSSNPLMTPF
LMDLCNDDYHMTTKEYLQENDIENVLNEWPVDLV
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttcttgtagtgaatggaataataaatttattccccaaactgatcaaagtgaa
ttctatgatgaagtttataatgattgtaatgcgagtgctagtggtggctgtggtgatggt
acaggtggctgtggtgaacttccattgcaaccacaacaacctcaacaatacgccacatct
aatcagttttatgaaacgtcttcattaagttctgtcaataattataataattttaccacc
actaatgaggaaagtgttaattttaacaataactacaacaataatcatactactgccttg
caatgtcaaatgaattctaatgctaataatgcaaattcattaaatttcaatcaaaataat
caaagtgctttccaaaataatcataataacaacaacaactatatgaatcctttaactcca
acttttgctcatgctcaagatacaaatatcccacaacaatttcagcagcagcaacaacaa
caatttgcttatcaacgatcaaatcttattaataaccaacaaaaccacaataattttttt
aattcatcacaacaacctcagcaacaaccacaacaacaacaacttgttttgtataattcc
aacgctccccaacaacctgttgtaacccaacaatataatttccaaccccctcccccttcg
cgcatgctaaataattactataatcttcatcataatcgtcagccgcaacttcaccatcaa
caatatcagctgcaacagcagcaacagcttaatcagcagtcgttggttactccttgtgca
ccatctattccctgtcaaggcaatcagccttggacttatgcgtattgttatggttatggc
ccctatagtaaccaagagccctgccaattcactcaagttgttgatattgaagactttatg
aacaatgaaaaacgtaaagaacgttctcgagatgccgccagatgtcgtcgatctcgcgaa
accgaaatctttaccgaattggcagaagttttacccttgaaaaaggaagatgtccaacaa
ctcgacaaagcctctgtcatgcgtgtagccatagcatatttgaaagtgcgcgatatgttg
aaaatgtttccaaaaatccaagaactacttggtgatttacaactctgcggcgacaacaac
agcagcattgaaaattctgaagccaatgatgatacttctgcttttaatagctctctagat
tcccatgattcatccacacaatcttctcaagcatccgaagattctaatcaacaatcagct
atagaatcttcaaaaaccttggagtcttctactttgactgccacgaatggtgacagtgct
ggtgtggatgattttagtttgttacttaagcaaaccatggatggtttcttgttgattttg
tccaatgatggtgatattacttatgtcaccaacaatatcagtgactatttgggtttgtca
aagattgatcttttgggccaacagatatgggaatatgcccatcaatgcgatcatgctgag
cttaaggaggctctcaatttaaaacgcaatggcttgaccaataaagtcaaagatgagaat
cttttagaggagggtatttctaccgatcatcgtgatttgtttgtgcgcttgaagtgcacc
attaccagtcgcggtcgcagtatcaatattaaaagtgcttcttataaggttattcatata
accggtcatttggtggtcaatacaaagggtgatcgtgtcttagtggccatgggtagaccc
ataccacatccctccaacattgaagtgcccttaggcacctctacatttttgaccaaacat
tcgttggacatgaagtttacctatgtggatgacaaaatgtataatttattgggctacaaa
cctgaagatttacttgaaacatctttattcaattgtcatcatggtattgatacagacagc
ttaatgacaacttttaaaaatgttctctcgaaaggccagggtgaaacctgtcgctatcgt
tttttgggcaaatacggcggttactgttggatagttactcaggcaacaattgtttatgac
aaactaaaaccacaaagtgtggtctgtgttaattttgttataagtaacttggagaaaaag
catgaaatttatactctgcaacaatacgaagaatcgcaaaaatttaaacttgaagaaaat
aataataataaaacacaaggtttaaatgaaaataaacaccaggaagagttaataaataaa
gatcaacaactaaaagaggaaaaattatttgctgctacggaattgcaaaaacctttagaa
gcagcaataacaaaaattgaaacttcaacaccaccagcaacaccactcaataacaataac
aatatcaataataataataatcaaaaaataaaagaagatcttataaatataaaacaagaa
cacataccaccaattgctataaataataataaaaataaaaccttaatcgaaactagcccc
tcaactacagctactacccctgtagtagctcccttaaaaccacctacacaacaaccacaa
ttaccactccactgtcccaccactactgttacccatactattttcaataaatcgataata
tcagcacccaaattctctgctgaggacaaacgtcccaaaaccgttacttcgtctttgatt
ttaaccaatttacccactaccacctcgactcagtcgattttacaacatccacctttgaat
gtggttgctacgcgtgcccctcaatcagtaacagcttcggtattttccccattgccgccg
tcgccgccatcaccaccaaaattaccttcgtctacggccacagctgcaattttagctcta
caacaatcggaaggtggaccacactcagtcaacgcgaatcatccacaagatatgaataaa
ggatatttaacatttgccgaggatgccacagaattaacaatgcttaaagaagaaccagac
gatttaactgcccacttagtggccacaaatgctgtcgatgcctgcatgccactcgatgaa
tcgggccctttgtttggtgagattttagttggttttggcatgggctcttatggcagtctc
ttacccgatgacatcaattctttagactccaacacatcgtccacagaacatagcaataat
aatcacaacaacaatagcaataatcaaacaacaatcaaatctgctggcaatacatgttca
tcgtcatcggcatcgcctacatcgtcatcgactacatcttcgtataatgcatcaatattg
gcagcaacaacaagtacacataatcatagacaatcatcgccgtcatcaatgataactaca
acaacatgtgcaacaaataacaatacaataacaacaacagcagcaacaacaaatagcaca
aacattgatccatttataaattatcgtgatgaatcgaatgatacaaattgctcacagcat
ttactgtcgccaagtgttacatccaagagtcccgaaggtagcagcctaccctcattatgc
agtccaaactcattaagtcaagaagatgaattttcatattacaccatgaatgtcgatgac
atggatgatttaacaatgcgtgctccctatatacccatgaatgaacaagacgatttaccc
ttgttaacctcagacgattatatgtggagtagtggtaatgcctttacgcccgatgagttt
agtttgaacacaaaagattcagataatttgcaagcattgcaaatcaatcaaacgttgaac
tatcaacagcagcaatttacccaacagcagcagcagcaacagcaaacgcaacaattttcg
aattcattatgttcttcgccagcctcaacagtatcctcaatgtcgccatcgcccatacaa
cagcaacaacatctgcagcagcaacagaattctcaacaaattttctctgctgattcctct
gaattggccgctttattgtgtggctctggcagtggttctctttccatactccaggatgcc
acaaattttacaaattctttaaatttaaacggtggctcagcaactacattagttgcggct
ggtggtaatagtggtagtaatcaaagcaacattagtgttgaaaacagtgttggtttaact
gacgatttggatagtgttagtgtggctagttcgtcgacgacccctactttggatcatcat
cagcaattgcaacagcattgtttgcaacaatttcaagaacagttgcaacagcaacgtcaa
caacaacagttattgagtggtttgaatatcaattgtaaaaaagaaaaattcgaatcagca
aataattcgccatcgttgtcatcgaatctatgcgattccatagaggatactttcgataat
gtctatagcaagaattcaacaaatttggattgttggaatgaatttttgcaaatcaataca
aatgagaatacaaatacaacaaataataataatgctgctgcaacaacagtgttggcaaat
ttaagacaagaagactgtaaacaacaattgcacatgcaattgcaacaacaacagcagcag
caacaaacacaaaacattattataaatgcagtgccattgataacaatacaaaccacaagc
aataacaaaaatgtattgatccagcaacaacaacagcagcagcagctgtcccagcaccat
catcaacagcagcaacaacaacaacaacaaagcaatacaaaatctttaaataaagtgaat
accgtcaaactgacacccattacaagtacggctacaataaagattattgaaaacaaacag
cccttgttgcagcagcaacagcacaacatcattaaaaccgcttacatacaggcagcacct
acaacaactccagctgtgactgctctacacaacagcaacaataagaggcatttgtccaac
aacctaattgccaataatgccttggaatcgaaacgtttgaaaagcaatattatggacttg
caaaattcaaccaccacatcgcaattattacagcaattgataacaacaccgcagcagcag
caaccaggaaatttgaatgccaagaattcaaagggaggtttggaatcaagatggtcttct
aatgaaaatcaagctttaagccagcaacaacaacaacagcagcagcaaaagcagcaaaaa
caatcaaacagtgttttgaaaaatctgctgattagtggttgcgataaaacaaaattgccc
aaaccggaaatcataactattgaagatggctccaggtcttcgatgcaatcgccagacctt
tgtgtttcaccctcattgaccagaccattgcagtgcatgacctcgccggccaccgtattg
cgtaattatcgtcataatccctggataggaggaccaggtgttttgccatcacccacaaca
agtttgataactaatgacgattctaatccgcctggtttgtcgccatgtgatgccatcgat
tcggccagcgatagcggcattgatgacataagtgtagctgaaaatatgtcaccacttaag
agaccctaccaacaacaacaaatgacggcagcaacagtaattgttaacaacaacaataat
aaaattatagacatcgataacaacattataaaattggccaacaacaataagattaatgaa
aatataaaatccaccatagctcccataactacgaccactgtaactagtgctgtactaatg
caaggagcggagctggccaagaaattacttgaagacactgaagaggatggtgctactatg
tgcaaacgcaagagatcaatatcgtatatagacagcagcaaccctttgatgactcctttt
ctaatggatctatgcaatgatgactatcatatgactaccaaggagtatttgcaagagaat
gatattgaaaatgttttgaatgaatggcccgttgatttagtttag
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integrated database retrieval system
