Calliphora vicina (urban bluebottle blowfly): 135963540
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Entry
135963540 CDS
T10781
Symbol
PNPase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135963540 (PNPase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135963540 (PNPase)
03016 Transfer RNA biogenesis [BR:
cvj03016
]
135963540 (PNPase)
Enzymes [BR:
cvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
135963540 (PNPase)
Messenger RNA biogenesis [BR:
cvj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
135963540 (PNPase)
Transfer RNA biogenesis [BR:
cvj03016
]
Prokaryotic type
tRNA degradation factors
135963540 (PNPase)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
S1
Fasciclin
Motif
Other DBs
NCBI-GeneID:
135963540
NCBI-ProteinID:
XP_065371523
LinkDB
All DBs
Position
1:106773680..106776902
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AA seq
789 aa
AA seq
DB search
MKYSLNYLKLLNFRCRNSTNINKFIRSYSSDIPQLEVKFSNGRNLKMTTGKYARFTNATA
VCEMGDTAVMVTAVSKAKPTPGTNFMPLVVDYRLKNAASGRIPTNFMRREMGPSEKEILS
ARLIDRSVRVLFPYEYRTETQLVCNMLAMDAVYSPDVLAINAASLALSMSDIPWNGPVGA
VRLGLCDGEIIVNPTRRELQSSQLDLVVTATKQNLVVMLEGKGNVVLQQDLFKAIKQGTK
EAQSIINEIDNVRRTYGKEKQSLQNLPVTNEEITDAVRTMSEMRLREIFQDERHDKLSRD
QAVNEVRINVIDKVWSSYPDTEPSVIVEEFNRLCRLLFRELIFETDLRCDGRDYDSLRNI
TCNVDLYKPLHGSALFQRGQTQVFCTVALDSQESAMKLDTLSALESGVKAKNFMLHYEFP
PYATGEVGRVGGVGRRELGHGALAEKALLPTLPNDFPFTVRLTAEVLESNGSSSMATVCG
GSLALMDAGVPVTARAAGVAIGLVTKYENNDTKHLQDYRILTDILGIEDYMGDMDMKVAG
TRKGFTAIQADLKIPGIPLKVVMESLQKATDAKSRILDIMSEAIAEPRKVKKDCWPVTER
LQIEPQQRAQLIGPSGINLRKIYLETGCTATTEDETTFTLFAPSQAAMDEAKEMFDALLV
TKERIPNLEFGGIYSATITEVRDTGVMVILYQGMHPALLHNSQLDQRKVAHPSALGLEVG
QEIQVKYFGRDPVSGFMRLSRKVLQPTSRIVRHLNKGSTETASKLADHSESQEEPQQLSN
EESTKTPSS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattctttaaattatttgaaactattaaactttcgttgccggaatagcacgaat
ataaacaaatttattcgttcctatagctcggatataccacaattagaagtaaaattttca
aatgggagaaatttaaagatgacaacgggcaaatatgcccgttttaccaatgccactgcc
gtttgtgaaatgggtgatacagccgttatggtcacagccgtttcgaaagccaaacccaca
ccgggtactaattttatgcctttggtggtagattatagactaaaaaatgctgcttctggt
agaatacctacaaattttatgcgtcgtgaaatgggtccttcggaaaaggaaattttatca
gcgcgtttaatagatcgttcagtgcgtgtcttgtttccttatgaatatagaacagaaaca
caattggtatgcaatatgttagccatggatgctgtttattctccagatgtgttggccata
aatgcagcatctctggctttgagtatgagtgatattccatggaatggtccagttggggca
gtgagattaggcctttgtgatggtgaaattattgtgaatcccaccagacgtgaattgcaa
tcctcacaactggatcttgttgtgacagccactaaacaaaatctagtggtcatgttagag
ggcaaaggcaatgtggtattgcaacaagatctcttcaaagccataaagcaaggcaccaaa
gaggctcaaagcataattaatgaaattgataatgtacgccgaacctatggcaaggaaaaa
caaagtttacaaaatctacccgtaacaaatgaggaaataacggatgctgtacgcaccatg
agtgaaatgcgtttgcgtgaaatattccaagatgaaagacacgataagttatcacgtgat
caggctgtaaatgaagtgcgaataaatgttattgacaaagtctggtctagttatccggat
actgaaccctcagtgattgtagaagaatttaatcgtttgtgtagattgctgttcagggag
ttgatatttgaaactgatctacgttgtgatggtagagattatgatagtctgcggaatatt
acttgtaatgtggatttatataaaccattgcatggatcggctttgttccaaagaggtcaa
acacaagttttctgtacagtggctttagattctcaggaatccgctatgaaattggatacc
ttatcggctttggaaagcggtgttaaggctaaaaactttatgcttcactatgaattccca
ccctatgccaccggtgaggtaggacgtgtcggaggtgttggtcgccgtgaacttggtcat
ggagctttggccgagaaagctttattacccacactgcccaatgatttcccctttaccgta
agactaacggccgaggtattagaatcaaatggttctagttctatggccactgtatgtggt
ggctctttggcactcatggatgccggcgtaccagtaacagcaagagctgccggtgttgcc
attggtttggtaacaaaatatgaaaacaatgatacaaaacacctacaggactaccgcata
ttgactgatattttgggtattgaagattatatgggcgatatggatatgaaagtggcgggt
acccgcaaaggtttcacagcaatacaagcagatttaaaaatacccggtatacctttgaaa
gttgtcatggagtctttacaaaaagccactgatgccaaatcacgtatattggacataatg
tcagaagccatagcagagccgagaaaagtcaaaaaagattgttggcctgtgacggaacgt
ttgcaaattgaacctcaacagagagcacagctgataggaccaagtggcattaatttgagg
aaaatttatctagaaacaggttgcactgccactacagaagatgaaaccacatttacacta
tttgctccctcgcaagctgccatggatgaggccaaagaaatgtttgatgctttgctggtg
accaaagagagaatacccaatttagaatttggtggcatatattccgccactataaccgag
gttagagatacgggggtaatggtgatattataccaaggcatgcatcccgcactattgcat
aattctcaattggatcaacgaaaagtggctcatccctcggctttaggtttagaagtgggc
caagagatacaagttaagtactttggcagagatcctgtatctggcttcatgcgtttgtcg
cgtaaagttttacaacctacctcgcgtattgtacgtcaccttaataagggctccacagaa
accgcctctaaattggccgatcatagtgaaagtcaagaggaaccacaacaactgtcaaac
gaagaaagtacaaagactccatcttcatag
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