Calliphora vicina (urban bluebottle blowfly): 135963590
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Entry
135963590 CDS
T10781
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03013
Nucleocytoplasmic transport
cvj03015
mRNA surveillance pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135963590
09122 Translation
03013 Nucleocytoplasmic transport
135963590
03015 mRNA surveillance pathway
135963590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135963590
03041 Spliceosome [BR:
cvj03041
]
135963590
03009 Ribosome biogenesis [BR:
cvj03009
]
135963590
03012 Translation factors [BR:
cvj03012
]
135963590
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135963590
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135963590
mRNA cycle factors
Stress granule specific factors
135963590
Spliceosome [BR:
cvj03041
]
Complex C
Other components
EJC/TREX
135963590
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
90S particles
Helicases
135963590
Translation factors [BR:
cvj03012
]
Eukaryotic type
Initiation factors
eIF-4
135963590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
135963590
NCBI-ProteinID:
XP_065371582
LinkDB
All DBs
Position
1:110628826..110630303
Genome browser
AA seq
400 aa
AA seq
DB search
MARKGGAPAEDLSNVEFETSEDVEVIPSFNAMGLKEELLRGIYAYGFEKPSAIQQRSIKP
IVKGRDVIAQAQSGTGKTATFSISILQSLDTSLRETQVLCLSPTRELAVQIQKVILALGD
LMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE
MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI
KQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM
PQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRF
GRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtaaaggtggagcacccgcagaggacttgtcaaatgtagaatttgagaccagt
gaagatgttgaagtcatacccagttttaatgccatgggcctcaaagaagaattactcaga
ggcatttatgcatatggttttgaaaaaccctccgccattcagcagcgtagtatcaagccc
attgtaaaaggtcgcgatgtcattgcccaggcccaatctggtaccggtaaaacagccact
ttctccatatccatattacagagtctggacacgtctctgcgtgaaacacaagttttatgt
ttatcaccaacacgcgagttggctgtacaaattcaaaaagtaattttggccttgggtgat
ctaatgaatgtccagtgtcatgtttgcataggaggcacaaatttgggtgaagatatacgc
aaattggactatggtcaacatattgttagtggcacgccgggtagagtattcgatatgatt
aaacgacgtgttttgcgtaccagagccattaaaatgttggtcttggacgaagctgacgag
atgttgaacaagggttttaaagaacaaatctatgatgtgtatcgttatttgccacccgcc
acacaagtcgttttgatatcggctacattgccccatgaaattttggaaatgacctcgaaa
tttatgacagatcctattaggattttggtaaagcgtgatgaattgacattggaaggaatt
aaacaattctttgtagccgtcgaacgtgaagaatggaaattcgataccttatgtgatctc
tacgataccttgaccataactcaagctgttatattctgtaatacaaaacgtaaagtggat
tggttgacggaaaaaatgcgtgaagctaattttaccgtcagctccatgcacggtgatatg
ccacaaaaagaacgtgatgaaattatgaaggaattccgtgctggccaatcacgtgtactc
attaccacagatgtttgggcacgtggtattgatgtacagcaagtgtcgctggtcataaac
tacgatttacccaacaatcgtgaattatatatacatcgtattggtcgctcgggtcgtttt
ggacgcaaaggtgtggcaattaattttgtcaaatctgatgatattcgtattttacgtgat
attgaacagtactattcaacacaaattgatgaaatgccaatgaatgtggctgatttgatt
taa
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