Calliphora vicina (urban bluebottle blowfly): 135963678
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Entry
135963678 CDS
T10781
Symbol
SPARC
Name
(RefSeq) ribonucleoprotein RB97D isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135963678 (SPARC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135963678 (SPARC)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135963678 (SPARC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
135963678
NCBI-ProteinID:
XP_065371697
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All DBs
Position
1:complement(118708871..118754295)
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AA seq
479 aa
AA seq
DB search
MSIKGDEKRDDLNDDGANNDGNNSDDSVEFIGTIKDDDICELEHLRKLFIGGLAPYTTED
SLRNFYSQWGKVVDVVVMKDQDTKRSRGFGFITYTKAFMVDKAQDNRPHIIDGKAVEAKR
ALPRPEREAQENKSASVKKLFVGGLKDNHDEDCLEEYFSQFGKVVSIKILTDKTTGKRRG
FAFIEYDDYDAVDKAILHKTHSIKYVVVDVKKSIYSKELQKKNALHHNNDGGNNMEKDNK
MSSQGNYRNNAPLQPPSHQPPPNYNQWGPPAPPMPSQNYGCYQQPPMPQPPQQQQAPHWN
YPAAPNTWNSPPQPPGIPQPPPPAWNNNQWGYPPPNVPPCPPGPMPPNQMPPPGTQPPPN
WQQPPAVPPIGPPPPHHQQPPVQPQIPPPNFGTGYQQSYNGGPTKHQSNMNSNRMNPYSG
PQNSNNSYNNIQIPPAPGYGGYNAGPPNGKPPVNNNNGPGSVPNPMSNNGPSSSGKYRR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaaggtgatgaaaaacgcgatgacttaaatgacgatggtgctaataatgat
ggtaacaatagtgatgactctgtggaatttattggaactataaaagatgatgatatttgt
gaactggagcatttaagaaaactatttattggtggtttagccccatacaccacagaagat
agtctcagaaatttctacagccagtggggcaaagtggtcgatgtggttgtaatgaaagat
caagataccaagagatcaagaggtttcggctttataacctacaccaaagccttcatggta
gacaaggcccaagataatcgtccacatattatagatggcaaagctgtcgaagctaaacgt
gctttaccacgtccagaacgtgaggcacaagaaaataaaagtgcatcagttaaaaaacta
tttgttggtggtctcaaagacaatcatgatgaagactgcctagaggagtatttttcacag
tttggaaaagttgtatcgatcaaaattcttaccgataaaaccacgggcaaacgtcgtggt
tttgcatttatcgaatatgatgattatgatgctgtggataaagctatattacacaaaact
cattccattaaatacgtggtggtggatgtaaaaaaatccatttatagcaaagagctacaa
aagaaaaacgctctacatcataataacgacggtggcaataatatggaaaaggacaataaa
atgtcttcgcagggaaattatagaaataatgcgcctttacagccgccatcacatcaacca
ccaccaaactacaatcagtggggaccacctgcaccacctatgccctcgcaaaattatggc
tgttatcaacaaccacccatgcctcaaccaccgcagcaacaacaagctccccattggaat
tatccagcagcaccaaatacatggaactcaccaccacaaccacctggaattccccaaccc
cctccaccggcatggaataacaatcaatggggttatccaccaccaaatgtaccgccatgt
ccacccggtcccatgcccccaaatcaaatgcctccacccggtactcaaccaccaccaaac
tggcaacaaccaccagcagtaccaccaattggaccacccccaccacatcaccaacaacca
ccagttcagcctcaaataccgccacccaatttcggtacaggctatcagcaaagctataac
ggtggacccaccaagcatcagagtaatatgaattcaaaccgcatgaatccctacagtggt
cctcaaaattcaaataactcatataataatatacaaataccacctgctccgggatatgga
ggctataatgccggtccacctaatggtaagccacccgtcaacaacaacaatggtcccggg
tcggttcccaatcccatgagcaataatggaccttcttcaagtggcaaatatcgacgctaa
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