Calliphora vicina (urban bluebottle blowfly): 135963793
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Entry
135963793 CDS
T10781
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135963793
09123 Folding, sorting and degradation
03018 RNA degradation
135963793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135963793
03041 Spliceosome [BR:
cvj03041
]
135963793
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135963793
mRNA degradation factors
5'-3' decay
Lsm complex
135963793
Spliceosome [BR:
cvj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
135963793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM14
SM-ATX
Motif
Other DBs
NCBI-GeneID:
135963793
NCBI-ProteinID:
XP_065371850
LinkDB
All DBs
Position
1:complement(126010028..126010592)
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AA seq
91 aa
AA seq
DB search
MTAVPPPTNVSTLLPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLDDVTEYEN
TPEGRRITKLDQILLNGNNITMLVPGGDIPE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgttccaccacctacaaatgtttcgactttattgccattagaattggtggac
aaatgcattggttcccgcatacacattattatgaagaatgataaagaaatggtgggaaca
ttgttaggatttgacgattttgttaatatgctactggatgatgtcactgaatatgaaaat
actcccgaaggaaggcgtataacaaaattagaccaaattcttttgaatggaaacaatata
accatgttggtgcctggtggcgatataccggagtag
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