Calliphora vicina (urban bluebottle blowfly): 135963826
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Entry
135963826 CDS
T10781
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135963826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135963826
Spliceosome [BR:
cvj03041
]
Complex B
Other components
Prp19-related factors
135963826
Complex C
135963826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
RRM_occluded
Torus
zf-CCCH_2
zf-CCCH_4
Nup35_RRM_2
zf-CCCH
zf-CCCH_3
RRM_7
zf-CCCH_10
zf-CCCH_DUS3L
SpdB
RRM_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135963826
NCBI-ProteinID:
XP_065371888
LinkDB
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Position
1:129663738..129665282
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AA seq
424 aa
AA seq
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MSMSKTTNTYNRQNWEDAEFPILCQTCLGDNPYVRMIKERFGKECKICTRPFTIFRWCPG
ARMRFKKTEICQTCARLKNVCQTCLLDLEYGLPIQVRDAALKIADNLPQSDVNKEYYIQN
VDRELEDGDGTEAAGAVGKSLAASEMLSKLARTAPYYKRNRPHICSFWVKGECKRGEECP
YRHDKPNEPDDPLCEQNIKDRYYGRNDPVAEKIMKRAASLPTLEPPEDRNITTLYVGNLP
EEITEPELRDHFYQFGEIRSIALVPRQQCAFIQYTKRSAAELAAEKSFNKLVLQGKKSTI
KWAHSQAKQGAAKTDRRFDVNAIAPAATQNPNDFFNLQQEQVTVLPPGMKLHQIPPSLIP
ASSYQMYSQAYAAPYSMPVASTSAQAAAAAAAGSSLDSIPPPPSAGGSGHYPSQDPSRLG
AVKK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcaaagactacaaatacttacaatcgacaaaattgggaggatgccgaattt
cccatactttgtcaaacatgtttgggtgacaatccgtacgtgcgtatgattaaggagcga
tttggtaaagaatgtaaaatatgcaccaggccatttacaatctttcgttggtgtcccggt
gctagaatgcgctttaagaagactgaaatttgccagacatgtgcacgtttgaagaacgtt
tgtcagacgtgtttgcttgatttggaatacggtttgcccatacaagtgagagatgcagcc
ttgaaaatagcagacaatctgccacagagtgacgtcaacaaggaatattacatacaaaat
gtagatagagaattggaagatggtgatggcactgaagcagcaggcgctgttggtaaatca
ttggcagccagtgaaatgctatcgaaattggcgcgtacagctccctattataaacgaaat
aggcctcatatatgttcgttctgggtaaaaggagaatgtaaaagaggcgaagagtgtcca
tatcgtcatgacaaacccaacgaacccgatgatcctctatgcgaacaaaatattaaagat
cgttactatggtcgtaatgatccagtggccgagaagattatgaagagggcagcctcacta
cccactctagagccaccagaagatcgcaacattactacactatatgttggaaatttaccc
gaggaaataacagaacctgaactcagagatcatttctatcaatttggtgaaatacgctct
atagctttggtgcctcgccagcagtgtgcttttatacaatacacgaaacggtccgcagct
gaattggccgccgagaaaagtttcaataaattagtgttgcagggtaagaaatcaaccata
aaatgggctcactcccaggccaaacagggggctgcaaaaacagatagacgttttgatgtc
aatgctatagcaccagcagcaactcaaaatccaaatgatttctttaatttacaacaggag
caagtaacggttctaccacctggtatgaaattgcatcaaataccaccaagtcttataccc
gcctcatcatatcaaatgtattcccaagcttatgcggccccatattctatgccggtggct
tctacatccgctcaagcagctgctgccgctgctgctggcagttccctagactctatacca
ccgcctcccagtgctggtggtagtggacattatcccagtcaggatcctagtcgtttgggc
gcagttaaaaaataa
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