Calliphora vicina (urban bluebottle blowfly): 135963980
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Entry
135963980 CDS
T10781
Symbol
Rm62
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135963980 (Rm62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvj03041
]
135963980 (Rm62)
03009 Ribosome biogenesis [BR:
cvj03009
]
135963980 (Rm62)
Enzymes [BR:
cvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135963980 (Rm62)
Spliceosome [BR:
cvj03041
]
Complex A
U1 snRNP components
U1 related factors
135963980 (Rm62)
Complex B
135963980 (Rm62)
Ribosome biogenesis [BR:
cvj03009
]
Eukaryotic type
Pre-60S particles
Helicases
135963980 (Rm62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135963980
NCBI-ProteinID:
XP_065372084
LinkDB
All DBs
Position
1:142845131..142855066
Genome browser
AA seq
747 aa
AA seq
DB search
MFKLIVPLLAKNSCYENANTKAAYCIKNNLISSSTKNVMENLTLRRHFLFSTTNRKTIQA
FPTIPKHQLGVSNRYLGQQLELLPANKIIKQFYRQFNCSNVLFVESSAADDTTLKEKSLT
KVQATKRDSSFNRKQTSLYQEDYSDEENNFGKMAPHDRTYGANRGGRDEGGSGGGNRYGN
RGGGGAGGSGGDYHGVRKGRVEKGGRGNDRGGRGGGFGGGFGGGNGFGDRRGGGGGNSQD
LSIRDMDFTNLSPFKKDFYKEHPIVANRSPFEVQRYRDEHEITVRGEAANPIQDFDEAYF
PDYVMKEIQRQGYKAPTPIQAQGWPIAMSGHNFVGIAKTGSGKTLGYILPAIVHINNQQP
LQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIV
IATPGRLIDFLAAGATNLKRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSAT
WPKEVKQLAEDFLGDYIQINIGSLELSANHNIRQVVDVCDENDKEEKLKSLLSEIYDTSE
NPGKVIIFVETKRRVDHLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATD
VAARGLDVDGIKFVINFDYPQSSEDYIHRIGRTGRSNTKGTSYAFFTRNNAKQSKALVDV
LREANQEISPALEGMARNNRFGDGGRSRYGGGGNSRFNGTFKKGSMGGNRGYGGGNGGGG
YGGNSGGFGRGGGSSNGGGNARHSRFD
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattaatagtgcctttgcttgcaaaaaactcgtgttacgaaaatgcgaataca
aaagccgcatattgtattaaaaataatttaatttcatcatctaccaaaaatgtgatggaa
aatttaacactaagacgccattttcttttttcaacaaccaacagaaaaaccattcaagct
tttcccacaatacctaaacatcaattaggagttagtaaccgctatttaggacaacaacta
gagctccttcctgcaaataaaattattaaacaattttatagacaatttaattgctctaac
gtgttatttgtggaatcatcagcggcagacgatacaactctaaaggaaaagtctttgaca
aaagtacaagcaaccaaaagggattcatcattcaatagaaaacaaacatctttatatcaa
gaagactactcggacgaagaaaacaactttggtaaaatggctcctcatgacagaacttat
ggtgctaaccgtggtggacgtgatgaaggcggttcaggcggtggtaaccgttatggcaac
agaggaggtggtggtgctggtggcagcggtggcgattatcatggcgtacgcaagggccgt
gttgagaagggaggccgtggcaatgaccgtggaggtcgtggtggcggtttcggcggtggt
ttcggtggcggtaacggtttcggtgaccgtcgtggtggtggaggcggtaacagccaggat
ttgtctattcgcgatatggatttcacaaatttgtctccattcaagaaggacttctacaaa
gaacatcccattgttgcaaatcgctcaccctttgaggtgcaacgttatcgcgacgaacat
gaaatcactgtacgcggtgaagccgccaatcccattcaagatttcgatgaagcctacttc
cccgattacgtcatgaaggaaattcaacgtcagggctacaaggctcccacaccaattcaa
gctcaaggctggcccattgctatgagtggccacaacttcgttggtatcgccaagaccggt
tctggcaagactttgggttatattttacccgccattgtgcacatcaacaaccaacagccc
ttgcaaagaggtgacggtcccattgctctagttttggcacccactcgtgaattggcccaa
caaatccaacaggttgccaccgagtttggctcatcttcgtatgtgcgcaacacttgtgtg
tttggtggtgcccccaagggtggtcaaatgcgtgatttacaacgtggttgcgaaattgtt
attgccacccccggtcgtttgattgatttcttggccgctggcgctacaaatttgaaacgt
tgcacatatttggtgttggatgaagccgatcgtatgttggacatgggtttcgaacctcaa
attcgtaagattatctcccaaattcgtcccgatcgtcaaacccttatgtggtccgcaacc
tggcccaaagaagtcaaacaattagcagaggatttcctcggcgactacattcaaatcaac
attggttctttggaattgtcggccaatcacaatattcgtcaagtcgtagatgtatgcgat
gaaaatgacaaagaagagaaactcaaatctctactttcggaaatttatgataccagcgaa
aatcctggtaaagttattatttttgttgaaaccaaacgtcgtgtcgatcatttagtacgt
ttcatacgtagcttcggtgtacgttgcggcgctattcacggtgacaagtcacaatctgaa
cgtgatttcgttttacgtgaattccgctctggcaaatccaacatattagtcgctactgat
gtagctgctcgtggtttagatgttgatggcattaagtttgtaatcaatttcgattatcca
caatcctcggaggactatattcatcgtattggtcgtactggacgttcaaatacaaagggc
acatcatatgcattctttacacgcaataatgctaagcaatccaaggctttagttgatgtt
ttaagagaggctaaccaggaaatcagtccagctctagaaggtatggctcgcaataaccgc
tttggcgatggtggtcgttcacgttatggcggcggtggcaattcccgcttcaatggcaca
ttcaaaaagggttccatgggcggcaaccgcggctatggtggcggtaacggcggtggcggt
tatggcggtaacagtggaggcttcggacgcggtggcggtagtagtaatggcggcggtaat
gccagacattcgcgttttgattaa
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