Calliphora vicina (urban bluebottle blowfly): 135964056
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Entry
135964056 CDS
T10781
Symbol
twin
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135964056 (twin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvj03019
]
135964056 (twin)
Enzymes [BR:
cvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
135964056 (twin)
Messenger RNA biogenesis [BR:
cvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135964056 (twin)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
135964056 (twin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
135964056
NCBI-ProteinID:
XP_065372185
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All DBs
Position
1:148832556..148918715
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AA seq
577 aa
AA seq
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MKGNLYKMSRNKDKYESGNRRQQIFMSPEDVAAGKKSNWTGIEITGERNYLIKYNLKFYN
ILLFCYAFHLGSVRNISPSLWEFEHLTALYLNDNHLLRLPADIGQLVNLRTLDVSSNKLR
SLPAELGELIQLRELLLNNNFLRVLPYEIGKLFHLHVLGLMGNPLQKEFLSIYNEPNGTQ
KLLTYMLDNLSISVTPPPQRPWIPLAKPNKSRPACIFTVMCYNVLCDKYATRQMYGYCPS
WALSWEYRKKAILDEIRHYSADIISLQEIETEQFYNFFLPELKNDGYEGIFSPKSRAKTM
SEMERKYVDGCAIFFRASKFSLIKEHLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALL
KVKETAWDPVTEVTQISQALLVCTAHIHWDPEFCDVKLIQTMMLSNEIKSIIDEASHSFR
PGHKNDSNSVQLLLCGDFNSLPDSGVIEFLSKGRVHMDHCDFKDMGYKACLQRLLSNDTA
EFTHSFKLASAYSEDIMPHTNYTFDFKGIIDYIFYTKTGMVPLGLLGPISNEWLRENKVV
GCPHPHIPSDHFPLLVELELMHTASQQAPPNGLISRR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaacctgtataaaatgtctcgtaataaggacaaatatgaaagcggtaatcgt
agacaacagatctttatgtcacccgaagatgttgcagccggcaaaaaatccaactggact
ggcattgagataacaggtgaaagaaattatttaattaaatataatttaaaattttataat
attttattattctgttatgcttttcatttaggctccgttcgcaatataagcccttcattg
tgggaatttgaacatttgacagctttatatttaaatgataatcatttgttacgtttacca
gctgacattggacaattggttaatcttcgtacattagatgtatccagtaataaattacgt
agtttacctgctgaattgggtgaattgatacaattaagagaacttttgttaaataataat
tttcttcgtgttctaccttacgaaattggcaaattatttcatttgcatgttttgggttta
atgggtaatcctctacaaaaggaatttctatccatttataatgaacccaatggtacacaa
aaattattaacatatatgttggataatttgtcaatttccgtaacaccaccacctcagcgg
ccatggataccattggcgaagcctaacaaatctagaccagcctgcatttttaccgtcatg
tgttacaatgttttatgcgataaatatgccacccgtcaaatgtatggctattgcccatcg
tgggcccttagctgggaatataggaaaaaggccatactcgatgagatacgtcattattcg
gctgacataataagtctacaggaaattgaaacggaacagttttacaatttctttttgccc
gaattaaagaatgacggttatgagggcatattctcacccaagtcacgagccaaaacaatg
tccgagatggaacgtaaatatgtggatggctgcgctattttctttagagcctcaaaattt
tctcttattaaagagcacttgattgaattcaatcaactggctatggccaatgctgagggt
tcggacaacatgttgaatcgtgttatgcccaaggacaatatcggtttagccgctttactt
aaggttaaagaaactgcctgggatcccgttaccgaagtaacgcaaatatctcaagctctg
ttggtgtgcaccgctcacattcactgggatccagaattttgcgatgtgaaacttatacag
accatgatgttaagcaatgaaataaaatcaattatagacgaggctagtcacagttttagg
cctggccataagaatgactcaaatagtgttcaactattgttgtgtggtgattttaattcg
ttgcctgattctggtgttattgagtttttgagcaaaggacgcgttcacatggaccattgt
gactttaaggatatgggctacaaggcatgtctacaacgtttactctccaatgacacggct
gagtttacgcattcctttaaactggcctccgcctacagtgaggacataatgccgcacact
aattatacgttcgattttaagggcattattgactatatattctataccaaaacaggcatg
gtaccgttgggccttttggggcccatctccaacgaatggttgcgagaaaataaagtcgtg
ggctgtccacacccgcatataccctccgatcattttccattgctggtggaattggaacta
atgcatacggctagccaacaagccccaccaaatggcctcattagtagacggtag
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