Calliphora vicina (urban bluebottle blowfly): 135964063
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Entry
135964063 CDS
T10781
Symbol
RpA-70
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cvj Calliphora vicina (urban bluebottle blowfly)
Pathway
cvj03030
DNA replication
cvj03420
Nucleotide excision repair
cvj03430
Mismatch repair
cvj03440
Homologous recombination
cvj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135964063 (RpA-70)
03420 Nucleotide excision repair
135964063 (RpA-70)
03430 Mismatch repair
135964063 (RpA-70)
03440 Homologous recombination
135964063 (RpA-70)
03460 Fanconi anemia pathway
135964063 (RpA-70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvj03000
]
135964063 (RpA-70)
03032 DNA replication proteins [BR:
cvj03032
]
135964063 (RpA-70)
03400 DNA repair and recombination proteins [BR:
cvj03400
]
135964063 (RpA-70)
Transcription factors [BR:
cvj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135964063 (RpA-70)
DNA replication proteins [BR:
cvj03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
135964063 (RpA-70)
DNA repair and recombination proteins [BR:
cvj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
135964063 (RpA-70)
MMR (mismatch excision repair)
135964063 (RpA-70)
DSBR (double strand breaks repair)
HR (homologous recombination)
135964063 (RpA-70)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
IBR
Zn_Ribbon_TF
DUF8512
GDH2_N
HROB
Motif
Other DBs
NCBI-GeneID:
135964063
NCBI-ProteinID:
XP_065372196
LinkDB
All DBs
Position
1:complement(149021237..149026882)
Genome browser
AA seq
598 aa
AA seq
DB search
MPGIASLSKGVIPRIMAGEEVDSPVLQILCAKRIRDSDRLRLLISDSQYFNSFAMLASQL
NVTFGDGKLKDNSIVRVDKYITSVVNKSDAGKRVLIILEMTVLNSGDEVQHKIGEPISYT
EASQEKSAPKPAAAAPVAKKESYTNHNNNNNTMDQTLNAGLTHPIASLSPYQNKWVIKAR
VMSKSQIRTWSNAKGEGKLFNVDLMDDSGEIRATAFREQVDKYYDFLEVDKVYFISKCQL
KPANKQYSTLKNDYEMTFSSDTVIQACEDEDDTGIPEIKYDFVPISQVANLEPKVAVDCV
GVCKEVSDLQVFTSKNTNKEFKKRDLVLVDTSDAAVTLTIWGDDAVNFDGHVQPVILVKG
ARVSEFNGGKTLSLGNGSVMKINPDIPECHKLRGWFDNGGGENITNSVSARTGAGGGGYS
TEWRTFHEARNLGTGDKPDFFQTKAVVHLIKSQNAYYKACPQPECNKKVVDENNGHYRCE
KCNAVFPNFKYRLLVNMSIGDWTSNRWVTCFSDLAEQLLGRSAQEIGDAMDNNPTEAEEI
FSSINFQSYMFKIRCKVETYGDMSRNKLTVQSATPINYKEYNKYLINNLKELTGINKA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcatagcttctctttctaaaggcgtcattcctcgcattatggctggggaggag
gtcgattcgccggttctacaaatcctgtgtgccaaacgaatcagagattctgaccgcttg
cgtttattgatctcagacagtcaatatttcaatagttttgcgatgctggcgtcgcaattg
aatgtaacatttggcgatggcaaacttaaggataactccattgtcagagttgacaagtac
attacttccgtggttaataaaagtgatgctggaaaacgtgttcttattattctggaaatg
accgttttaaattctggtgatgaagtacagcataagattggtgaacctatctcttacacg
gaagcttcacaggaaaaatcagctccaaagccagctgctgcagcaccagttgccaaaaaa
gaaagctacactaatcacaataacaataataatactatggatcaaacactaaatgccggc
ttaactcatcccattgcaagcttgagtccatatcaaaataaatgggtcattaaagctcgt
gttatgtcaaaatcgcaaatacgtacttggagtaatgctaaaggagagggcaaactattt
aacgttgatttaatggacgattctggtgagatacgtgctacggcattccgtgaacaagtc
gataagtattacgattttttggaagtggataaggtatatttcatatccaaatgccaactc
aagccggccaataaacaatattcgacactcaagaatgattatgaaatgacattctcaagt
gatacagtaatacaagcgtgtgaagatgaagatgatactggtataccagagattaagtac
gactttgtacccatatcccaagtagccaatttagaaccaaaggtcgctgttgactgtgtt
ggtgtgtgcaaagaagttagtgatctacaagtattcacttcaaagaacacaaataaagaa
ttcaaaaagcgcgatttggtcttggtagacaccagtgatgctgcggttaccttgactata
tggggtgatgatgccgtcaattttgatggtcatgttcagcccgttatactcgtaaagggg
gctagggtcagtgaattcaatggcggcaaaactttaagtttaggcaatggttctgttatg
aaaataaatccagatattccagagtgccataaattgcgtggatggtttgataatggcggt
ggcgaaaatattacaaattctgtttcggcacgaactggtgctggtggcggaggctatagc
actgaatggcgtacattccatgaggctcgtaatttgggtactggtgataaaccagacttt
ttccaaactaaagcagttgtacatcttataaagagtcaaaatgcttactacaaagcatgc
cctcaacccgaatgtaataaaaaagttgtggatgaaaacaatggacattatcgttgcgaa
aaatgtaatgctgtatttcccaactttaaatatagacttttggttaatatgagcattggt
gattggacttcaaatcgttgggttacatgtttcagtgacttggctgaacagcttttgggt
cgctcagctcaggaaatcggtgatgccatggataacaatcccactgaagcagaagaaata
ttcagttccattaatttccaatcatacatgttcaaaatacgttgtaaagtcgaaacatat
ggagatatgtctcgcaacaaactgacagttcagtcggccacccccattaactacaaggaa
tacaataaatatttgataaataatttgaaagaattaactggtattaataaggcctaa
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