Chloracidobacterium validum: J8C06_00185
Help
Entry
J8C06_00185 CDS
T07355
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cvl
Chloracidobacterium validum
Pathway
cvl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J8C06_00185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cvl02022
]
J8C06_00185
02035 Bacterial motility proteins [BR:
cvl02035
]
J8C06_00185
Two-component system [BR:
cvl02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
J8C06_00185
Bacterial motility proteins [BR:
cvl02035
]
Pilus system
Twitching motility proteins
J8C06_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
bpMoxR
AAA_16
AAA_19
MCM
AAA_2
AAA_7
AAA_3
nSTAND3
AAA_22
PDE8A_N
HVO_0513_N
TIP49
Motif
Other DBs
NCBI-ProteinID:
QUW02907
LinkDB
All DBs
Position
1:47788..49230
Genome browser
AA seq
480 aa
AA seq
DB search
MADHVPSILIVDDELSMRELLDHVFRRAGYRTFVAENGAQALEALRGAVFDIVLSDVKMP
RLSGTELLHECRQLSPDTVVILMTAHGTVEQAREAFKLGADDFIQKPFDIDELKLIVKNA
FEKSLLRREVALLKRELGDRTRLENIIGRSRPMQEVFQLIQTIAGTNSTVLITGESGTGK
ELVARGIHACSPRADRPFVSINCGAFTETLLESELFGYMKGAFTGAATNKKGLFEAASGG
TLFLDEIGEMSLGMQVKLLRALQERSIRRVGGTEEIPVDVRVVAATNRDLSQMVEDGTFR
KDLYFRVNVIPITVPPLRERREDIRDLALYFLKKYGQNRVPPITGIAEAALKHLENYSFP
GNVRELENLIERAVALEPTHEVQPERLPESVLRYDPARAASAFDLPEQGIHLENFLMEVE
KSYILQSLRRTRGNQTKAAELLNMSVRSLRHLLDKHKIRQTASMFRESSPARTGDSSEAP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccatgtgccatccatcctcatcgtggacgatgagttgagcatgcgtgagttg
ctcgaccatgtgtttcgccgcgccggctaccggacgtttgttgccgaaaatggcgcgcag
gccctggaggcgttgcggggagcggtcttcgatatcgtgctttcggatgtcaagatgcca
cgcctttcgggcaccgaactcttgcacgaatgccgtcaactatcgccggacacggtggtg
attttgatgacggcccacgggacggtggaacaggcccgcgaagccttcaagttgggggcg
gacgatttcatccaaaagccgttcgatattgatgaactcaagctcatcgtcaaaaacgct
tttgagaagagtctcttgcgccgggaggtggcgctgctcaagcgcgagctgggtgaccgg
acgcgcttggagaacatcattgggcggagccgtccaatgcaggaagtctttcaactcatt
caaaccattgccggcaccaacagcacggtgctgattaccggcgagtctggcaccggaaaa
gaactggttgcgcgtggcatccatgcctgtagcccgcgcgccgaccgtccgtttgtctcc
atcaattgcggcgcgttcaccgaaacgctgcttgagtcagaactgtttggttacatgaag
ggcgcgttcaccggggcggcgaccaacaagaaagggctgttcgaggcggctagcggtggg
acgctctttttggatgaaattggggaaatgagcctcggcatgcaggtcaagctgttgcgc
gcgctccaggaacgctcgattcgccgtgtcggcggcacggaagaaatcccggtggatgtc
cgggtcgtggcggcaaccaatcgtgatttgtcccaaatggttgaagacggcacatttcgc
aaggacttgtactttcgggtcaacgtcattccgattacggttccgccgctccgtgagcgg
cgggaggacatccgcgacctggccttgtattttctcaagaagtacgggcagaaccgagtc
cccccgattacaggcattgcggaagctgcgctgaagcacctggaaaactactcgtttcca
ggcaatgtccgcgaactggaaaacctgattgaacgggccgttgcacttgagccaacccat
gaagtccaacctgaacgcctgcccgagagtgtgctgcgctacgatccggcgcgggcggct
tcagccttcgatctgccggagcagggtattcatctcgaaaacttcctcatggaggttgag
aagtcctatattttgcaatcgctgcgccgaacccgtggcaatcagaccaaggcggcggaa
ctgctcaatatgtcggtccgaagcctgcgccacctgctggataagcacaagattcgccaa
acggcgagcatgtttcgtgagagcagcccggcccgtactggcgacagctcagaagcgccc
tag
DBGET
integrated database retrieval system
