Chloracidobacterium validum: J8C06_00870
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Entry
J8C06_00870 CDS
T07355
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cvl
Chloracidobacterium validum
Pathway
cvl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J8C06_00870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvl03021
]
J8C06_00870
Transcription machinery [BR:
cvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J8C06_00870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
MerR-DNA-bind
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QUW03029
UniProt:
A0ABX8BBK1
LinkDB
All DBs
Position
1:complement(211614..213200)
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AA seq
528 aa
AA seq
DB search
MMDGNTDDILARIAGAARGKAFLSFDELNALLPPRITDVALIEDLLATLEQRGVRVGEEH
ERPSRTAASPAREAPPAPPGPASPTAFFEDPLRPYLQDMGRIAKLSAEDEAALLAGLKRA
DARFRKLLTRIPAAAGQVLQQAEAEDSTGSASVWFDPRTPPTDKDSQTDSAPATETAPLV
AWPDAVAQLRAALETVQQEHASLAAVQDVPAAAAWQRRRLARARIDLARLVQRLPLSRVG
YVALLEKLEQAHRAASPWLVVAATPEVVRQWLQGARQAFDRATAARQRLVETNLRLVVSV
ARHYNHRGLNLTDLIQEGNLGLLRAAERFTGQRNERFASYATWWIRRAMAQALSEQPRLI
RLPAAVRAELTQMLEAMHRLTLQLHREPNQTELAQALGFSLEKVQSLLRLAQPPVSLETP
VGDEEETTLGDFIADAHAANPLDDAARRQLRQDLDAALQSLNAREEKVLRMRFGLDRDGR
AYTLEEVAQFFALPRDSVRRIEADAMRKLRHPARSRALRQFLEGDDEA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggcaacaccgacgacattctggcacggatcgccggggcagcgcgcggcaag
gcctttctatcgttcgatgaactcaacgcgctcttgccgccgcgcatcaccgatgtggcg
ctgattgaagacctgctggcgaccttggaacagcgtggcgtccgcgtcggagaagaacac
gaacgcccatcacgaaccgctgcctcaccggcgcgtgaagccccgccggcgccacctggg
ccggcttcgccaacggcgttttttgaagacccgttgcgcccatacctgcaagacatgggc
cgcattgccaagctgtccgccgaagacgaagcggcgctgctcgccgggctgaagcgcgcc
gatgccaggtttcgcaagcttctgacgcgcattcccgccgcggccggacaggttctccag
caagccgaagccgaggattcaacgggcagtgcgtccgtgtggtttgatccgcggacgccg
ccgactgacaaggactcacagaccgacagtgcgccggcaactgaaaccgcgccactcgtg
gcctggccagacgcggtagcgcagcttcgcgcagcccttgaaaccgtacagcaggagcac
gccagtttggccgccgtgcaggacgttccagcggcggcggcttggcagcggcggcgcttg
gcgcgggcgcgaattgacttggcgcgcctggttcaacggctgcccctgtcgcgcgtgggc
tacgttgcgctgctcgaaaagcttgaacaagcgcaccgcgccgcttccccctggttggtc
gtcgcggcaacgccagaggtcgtcagacagtggttgcagggcgcgcggcaagccttcgac
cgggcaactgcggcacgccaacggctggtcgaaaccaacctgcggctggtcgtgtccgtc
gccaggcactataaccaccggggattgaacctgaccgatttgattcaagagggcaatctg
ggcctgttgcgcgcggccgagcggtttaccgggcaacggaatgaacgcttcgcttcctat
gccacctggtggattcggcgcgccatggcgcaggcgctcagtgaacagccgcgcctcatc
cgcttgccagccgccgttcgcgccgaactcacccaaatgctggaggccatgcaccgtttg
acgctccagcttcaccgtgaacccaaccagaccgaactggcccaggcgctggggttttcg
ctcgaaaaagtccagtctctgcttcggctggcgcagccaccggtgagccttgaaacaccg
gttggcgacgaggaagagaccacccttggcgatttcatcgcggacgcccatgcggccaat
ccgctcgacgatgcggcgcggagacagctccggcaagacctcgacgcggcgctccaatcc
ctcaatgcccgtgaagaaaaggtgctgcggatgcgctttgggctagaccgggatgggaga
gcttacacccttgaagaagtcgcccagttttttgcgctcccgcgggacagcgtccggcgc
atcgaggcagacgccatgcgcaaactacggcacccggctcgcagtcgcgcgctacgccag
ttcctggagggcgacgacgaagcgtga
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