Chloracidobacterium validum: J8C06_03990
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Entry
J8C06_03990 CDS
T07355
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cvl
Chloracidobacterium validum
Pathway
cvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
J8C06_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvl03019
]
J8C06_03990
03009 Ribosome biogenesis [BR:
cvl03009
]
J8C06_03990
04131 Membrane trafficking [BR:
cvl04131
]
J8C06_03990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvl04147
]
J8C06_03990
Messenger RNA biogenesis [BR:
cvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
J8C06_03990
Ribosome biogenesis [BR:
cvl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
J8C06_03990
Membrane trafficking [BR:
cvl04131
]
SNARE
SNARE associated proteins
Others
J8C06_03990
Autophagy
Aggrephagy
Other aggrephagy associated proteins
J8C06_03990
Exosome [BR:
cvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
J8C06_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
TPR_2
TPR_1
AAA_lid_3
TPR_11
AAA_5
nSTAND3
AAA_16
TPR_8
AAA_22
RuvB_N
AAA_33
TPR_12
TPR_16
AAA_25
AAA_28
AAA_14
TPR_9
TIP49
TPR_19
AAA_18
NACHT
IstB_IS21
TPR_14
Mg_chelatase
ABC_tran
AAA_19
DUF815
RNA_helicase
AAA_17
AAA_24
TPR_MalT
TPR_10
AAA_30
NPHP3_N
TPR_4
TPR_21
ORC-CDC6-like
AAA_11
Viral_helicase1
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QUW03605
LinkDB
All DBs
Position
1:934609..936732
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AA seq
707 aa
AA seq
DB search
MMDTAEARAANVRGNEHLQRGDYAAAIAAYQEAIAADPHARAYPRERGIIHANLAYALLL
SGELDAARAAYQTAIQLEPRRATYHNELGDVLFRLEDWSSALAAYHRAAQAETFMRVYPE
SPGLIQYNLGVTYQRLGDRGAARRHLAEAARREPRNETYRAALDQLGDAAEPVAAPIPSD
RPTFAAVGGCAEAKQAIAQAVRIVLDTERAARYRIRLNGILLIGAPGTGKTFLAEATAGE
FKLPLLRITLSEVTSKWAGEGIERLRQVFEQAAQRAPCLLFFDDFDGLAATLRDTESNIE
HRRFLEAFIQHIEQIRRQPRVVLMAATSQPDALDAAIVRPGRFDWRVTLHPPGTAERRAM
LESLLQARPIGEINVDHWATRTTGYTAADLTRLVNTAALNAFDANQLIADQHLAEALSQF
EASERFVGVKRSWQDIVLDEDVRAAFRLIQHLLEDPDAGRAFGLMPPRGAILYGPPGTGK
TTLARVLAYEARCSFYAITPSDIYAKWAGESERRVTELFQRARANRPSIIFFDEADALFG
ARSTAAGEAAPHVNRVVNQFLAEMDGLRANERLFVLAATNRLDLIDPAMLRAGRLSEKIH
VPLPNQAQRYALLKLFTRHMQFDANLCLDALAAKTAGMCGADIEELCHAAARAAFLRYLD
TPLSSRQCFVTEADFHRALLHTSACTAPSPVSPVTEPHLDAEAFAAR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggacactgcggaagcgcgcgccgcgaacgtacgcggcaatgaacatttacagcgt
ggtgattatgccgctgccattgctgcctatcaggaagcaattgcggctgatccgcacgcg
cgggcctacccacgcgagcgtgggatcattcacgccaacctagcctatgcgctgttgctg
tctggggagctggatgccgctcgcgccgcatatcaaacggccatccagcttgagccacgt
cgggcaacctaccataacgagcttggcgatgtacttttccgccttgaggattggtcatct
gccctggcggcctatcaccgggccgctcaagccgagaccttcatgcgggtgtatcccgaa
tcacccgggctgattcaatataacttgggcgtgacctaccagcggctcggtgaccggggc
gcggcgcggcgccacttggctgaagcggcgcggcgggagccgcgcaacgaaacgtaccgg
gcggcgcttgaccagcttggtgacgctgctgaaccggtggcggcgcccatcccgtcagac
cgccccacctttgcggcggttggtgggtgtgccgaggccaagcaagccattgcccaggct
gtgcggattgttctcgataccgagcgcgccgcccgataccgaatccgcttgaacggcatc
ttgctgattggcgcaccgggaacgggcaagacgtttcttgccgaggccacggccggagag
ttcaagctgccactgctgcggatcaccctcagcgaagtgacctcaaaatgggccggggaa
ggcatcgagcgccttcggcaagtgtttgagcaagcggctcaacgcgcgccctgcctgctg
ttttttgacgattttgatgggttagccgcgacgttgcgcgacaccgaatccaatatcgag
caccgccgcttcctggaagccttcattcagcatattgagcaaattcggcgacagccaagg
gtggtgctcatggcggcaacctcccagccggacgcgctggacgctgccattgtgcgtccg
gggcggtttgattggcgggtcacccttcacccaccgggaacggccgaacggcgggcgatg
cttgaaagtttattgcaagcccgcccaattggtgagatcaatgttgaccactgggccacg
cgcacaaccggatacacggcagccgatttgacgcgccttgtcaacacagccgcactcaac
gcctttgatgccaatcagttgattgctgaccagcaccttgccgaggccctgtcgcagttt
gaagccagcgagcgtttcgtgggcgtgaaacgctcttggcaggacatcgtcttggatgaa
gatgtacgggccgcgttccggcttatccagcacctgctagaagaccccgatgccggtcgc
gcctttgggctgatgccaccccgcggagcgatcctttacggaccgccgggcaccggcaaa
acgacgttggcgcgcgtccttgcctacgaagcccggtgtagcttctacgccatcacgcca
agcgacatctacgccaagtgggcaggcgaatcggagcgccgcgtcactgaactgtttcag
cgcgcgcgcgccaaccgccccagcattatttttttcgatgaggccgatgccttgttcggt
gcgcgctccaccgctgccggagaagccgcgccacacgtcaatcgcgtggtcaatcagttc
ctggccgaaatggacgggcttcgcgccaatgagcggctatttgttttagccgcgacaaat
cgtctcgatctcattgacccggcaatgttacgtgctggtcgcctgtcagaaaaaatccac
gttcccctgccaaaccaggcacagcgctacgcgctgcttaagctcttcacgcgccacatg
caattcgatgcgaacctgtgcctggatgcattggcagcgaagacagccgggatgtgtggc
gcggatatcgaggagctttgccatgccgccgcgcgcgcggcgtttcttcggtacttggat
acaccgttatcatcacgccagtgctttgtcaccgaagccgattttcatcgcgctttgctc
cacaccagcgcctgcacggcaccctcacccgtatcaccagtgaccgaaccacatctcgac
gccgaggcattcgcggctagataa
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