Chloracidobacterium validum: J8C06_05315
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Entry
J8C06_05315 CDS
T07355
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cvl
Chloracidobacterium validum
Pathway
cvl03030
DNA replication
cvl03430
Mismatch repair
cvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J8C06_05315 (holA)
03430 Mismatch repair
J8C06_05315 (holA)
03440 Homologous recombination
J8C06_05315 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvl03032
]
J8C06_05315 (holA)
03400 DNA repair and recombination proteins [BR:
cvl03400
]
J8C06_05315 (holA)
Enzymes [BR:
cvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J8C06_05315 (holA)
DNA replication proteins [BR:
cvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J8C06_05315 (holA)
DNA repair and recombination proteins [BR:
cvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J8C06_05315 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delt_C
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QUW03848
LinkDB
All DBs
Position
1:1273672..1274688
Genome browser
AA seq
338 aa
AA seq
DB search
MKATEFLRLPPTTPPDRLYVITGEDSYLQRACVQALRQRVIPEESLWAFNYSEHDLGQEA
LSRVLAVAQELPLPPTGRLVVVRNLDRLADTDVERLKDYVRRPATTTTVVFQAPTLDKRR
ASTTVLLKTATLIECQALVPEEARRWVTAYARERGFELPPMAASHLIGAVGCDLLRLTSE
VEKLMNYVGVGGRIEPEAVAALVVRSAQEDNFDLSEALWQSDAPRALRTLHRLLDRGAEP
VALVGLLAWQLRQMLTAHELMAVNTPREALLRELRLPPSRLTAFLGAVRKQSAPHLHWAL
MRLQAVDDAIKRGYATPRLNLEFFLCEVLVANQAGYSA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgactgagtttttacgattgccgccaaccacgccgccagatcggctctatgtc
atcacgggcgaggatagctaccttcagcgagcttgcgtgcaggctttgcggcagcgggtc
attccagaggaaagtctgtgggccttcaactactccgagcatgacctgggacaggaggcg
ctgagtcgtgtcctggcggttgcgcaggaactgcccttgcccccaactgggcggttggtc
gttgtccgcaaccttgaccggttggccgatacggacgttgaacgactaaaagattacgtc
cgccggccagccacgacaacgaccgtagtgtttcaagccccgaccctggacaagcgccgg
gcgtccaccacggtcttgctcaagacggcgaccctcatcgagtgtcaggcgcttgtcccc
gaagaagctcgccggtgggtgacggcttacgcgcgggagcgtggttttgagttgccgccg
atggcggccagtcacttgattggcgcggtcggctgtgatctcttgcgtttgaccagcgaa
gtcgaaaaactcatgaactatgtcggcgtgggcgggcgcatcgaaccagaagccgttgcg
gcattggtggttcggtcggcgcaagaggataattttgacctgagcgaggcgctttggcag
agcgacgccccacgcgccctgcggacgctgcaccggctgcttgaccggggcgcggaaccc
gtcgcattggttggattgctcgcctggcaacttcggcaaatgttgacggcgcacgaactc
atggccgtcaatacgccccgcgaggcgctgctacgtgagctgcgcttaccgcccagtcgg
ctgacggcctttctgggcgcggttcgcaagcagtcggcgccccacctgcactgggcgctg
atgcgcctccaggccgtggatgatgccatcaagcgtgggtatgcaaccccacgcctgaac
ctggagttcttcctatgtgaagtgctggtcgctaaccaggcaggttattcagcataa
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