Chloracidobacterium validum: J8C06_05500
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Entry
J8C06_05500 CDS
T07355
Name
(GenBank) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cvl
Chloracidobacterium validum
Pathway
cvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J8C06_05500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvl03400
]
J8C06_05500
Enzymes [BR:
cvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J8C06_05500
DNA repair and recombination proteins [BR:
cvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J8C06_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QUW03883
LinkDB
All DBs
Position
1:complement(1316625..1317527)
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AA seq
300 aa
AA seq
DB search
MPNDTVALPAAFNPELTLLGGQAFRWEARLAPGGKATYQGVVEDAVMTVAQIQGRWHVRL
VNHALTTERRCWLAHYFDLDRDYAGVHATLVKRLARMPGATGLADEVAPLAGLRLLRQPW
FEVLVSFVISANNHLPRIRQIINIISRKFGTPLTQDAYAFPTPAALATVPATVLRTECRV
GYRDRYLHQLAQSIAGHGQFWNQAATCPTDDLRQRLIALPGVGPKVAECVLLFGFHRWEA
FPIDVWVRRAMTALLAAQAPAHCRLTDRHIAEAAATHFGTLAGLAQQYLFEALRRRRHQP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaatgatacggtcgcgctcccggccgcattcaacccggaactcaccttgctcggc
ggacaggccttccgctgggaagcccgccttgcccccggcggcaaagcgacctaccagggc
gtcgtggaagatgccgtgatgacggttgcccagattcagggacgatggcatgtccggctg
gtcaaccatgccctaaccaccgaacgccggtgctggttggcgcactacttcgaccttgac
cgcgactatgctggcgtccacgccacactcgtgaagcgtttagccaggatgcctggcgcg
accggactggccgacgaagtcgcgccactggccgggctgcggctcttgcgccaaccgtgg
tttgaagtgttggtttcgtttgtcatttccgccaataaccatttgccgcgcattcgccag
atcataaacattatcagtcgcaagttcggaacaccgctcacccaagacgcttacgccttc
ccaaccccggcggcgctggccaccgtccccgctaccgtgctgcgcaccgaatgccgggtc
ggctaccgtgaccgctatctccaccaactcgcccaatccatcgccggccacggccagttc
tggaaccaggcggccacctgcccaaccgacgacctccggcaacgcctcatcgccctcccc
ggcgtcggtcccaaggttgccgaatgtgtgctcctctttggttttcaccgctgggaggcc
tttccgattgatgtctgggtgcggcgcgccatgaccgctctactcgcggcgcaagcgccg
gcccactgccgtctcaccgaccgccacattgctgaagccgccgccactcacttcgggaca
ctcgccggactggcccagcagtacctcttcgaggcgctgcgccgtcgccgtcaccagcct
tga
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