Chloracidobacterium validum: J8C06_05880
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Entry
J8C06_05880 CDS
T07355
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
cvl
Chloracidobacterium validum
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvl03400
]
J8C06_05880
Enzymes [BR:
cvl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
J8C06_05880
DNA repair and recombination proteins [BR:
cvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
J8C06_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QUW01908
LinkDB
All DBs
Position
1:complement(1409672..1411186)
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AA seq
504 aa
AA seq
DB search
METIWILGDQLTLRHPAFERLTPRDAVVLMIESSAHARRVRYHKQKLVFLFSAMRHYAEE
LRGLGWQVDYRREQPSFEAGFAAHVQQYRPTRIWLMEPTEYGVADLLQQLAAAWQVTLHQ
LPTTLFVSDRQAFAAWARGKKTLVMEHFYRRMRRQTGLLIEPDGEPTGGTWNYDKDNRQV
PPPHHPFPPLPRYAPDAITREVMDWVRRDFPDGYGHIEPFHWATTRADAEHFYRDFLDHR
LDLFGPYEDAMVAGQSALYHSLASPYVNVGLLDPLEAARQAEKAYRAGKARLTSVEGVVR
QFIGWREFIYQLYWLRMPDFATVNFFGDTRPLPHYYWDAKTHLRCLRETVTQLIETGHTH
HIQRLMVLGNFALIAGVNPQEVNTWFWLAYLDAYEWVTLPNVLGMSLYADGGFLATKPYA
ASAAYINRMSDYCTGCAYDPKRRHGDGACPFNSLYWDFLDRHREKLFPNQRMRMMYAAWD
TMRAAEREATLAWAQQILNRLEDL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatttggattttgggcgaccagttgaccctccgccacccggcctttgaacgc
ctgacaccacgcgatgcggtcgtgctgatgatcgaatcgtcggcgcatgcccggcgagtc
cgctatcacaagcaaaagttggtcttcctgttttcggcaatgcgccactatgccgaggaa
ctccgcgggctgggctggcaggtggactaccgccgggagcagccgagctttgaagccggt
tttgccgcccatgtgcagcagtatcggccgacccgtatctggttgatggagccaaccgaa
tatggcgtggccgaccttctccaacagcttgctgcggcgtggcaagtcacgctccaccag
cttccaacgacactgtttgtgagcgaccggcaggcctttgccgcgtgggcacgtggtaag
aaaacgctcgtgatggagcatttttaccggcgcatgcggcgacaaaccggacttctgatc
gagccggatggtgagccaaccggtggcacctggaactacgacaaagacaaccgccaggtc
ccgccaccacaccatccgtttccacccttgccccgctacgcaccagacgccatcacgcgc
gaggtgatggattgggtgcgccgagatttccctgatgggtatggtcacatcgagccgttc
cactgggcgacgacccgcgccgatgccgaacacttttaccgcgacttcctcgaccatcgc
ctggacctgttcggcccgtatgaggatgctatggtcgccggacagtcggcactgtaccac
tcgctggcgtcgccctatgtcaacgttgggttgcttgacccactcgaagcggcgcgccag
gccgagaaagcttaccgggctgggaaagcgcggctcacttccgtcgaaggtgtggtgcgg
cagttcattggctggcgggagttcatctatcagctctattggctgcgcatgccggacttt
gcgacggtcaacttctttggtgacacgcgcccactgccccactactactgggatgccaag
acgcatctacggtgtctgcgagaaacggtcacgcagctcatcgaaaccgggcacacccac
cacattcagcggctgatggtgttaggcaactttgctttgattgccggcgtgaatccacaa
gaggtcaatacgtggttctggttggcgtacctggatgcttatgagtgggtcacgctacca
aatgtgctggggatgtcactttacgccgatggcggttttctggcgaccaagccttacgcc
gccagcgctgcctacatcaaccggatgagtgactactgcaccggctgcgcctatgaccca
aagcggcggcacggcgatggcgcttgtccattcaatagcctttattgggattttctcgac
cgccatcgggaaaagctgtttcctaaccagcggatgcgcatgatgtacgctgcgtgggat
accatgcgcgccgccgaacgggaagcaacgctggcttgggcccaacaaatcctgaaccga
ctggaagacctttag
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