Chloracidobacterium validum: J8C06_07105
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Entry
J8C06_07105 CDS
T07355
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cvl
Chloracidobacterium validum
Brite
KEGG Orthology (KO) [BR:
cvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvl03016
]
J8C06_07105 (truB)
Enzymes [BR:
cvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J8C06_07105 (truB)
Transfer RNA biogenesis [BR:
cvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J8C06_07105 (truB)
Prokaryotic type
J8C06_07105 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
TSP_1
Cut8
Motif
Other DBs
NCBI-ProteinID:
QUW02133
UniProt:
A0ABX8B5C6
LinkDB
All DBs
Position
1:1701437..1702399
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AA seq
320 aa
AA seq
DB search
MLSGGLLIDKPPNATSHDVVALVRRFIGIKRVGHTGTLDPFATGLLVLCLGPATRLSRFL
TDTSKSYRAVLRFGFATDTQDLTGQPLTPPRATQGLTEDQLQAVAQTFLGKQMQTPPMYS
ARKIDGVALYQLARAGKVVVRAATPIEVFSFNFLPDAQGRVIRQDQQGAPIVECEVTCSS
GTYIRTLAHDIGERIGCGAHLVALRRTAVDGFTVDEALTLEDLQRCVMSGEWSGQVLSPL
DLLRGWPRVRLGQPLANRFICGQALDISPDDITPDNRRPFPVAPEVGVAVTDEAGYFLGV
GRYDHRTGWLRPQTVMPTAH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggaggtttgttaattgacaagcctcccaatgccacctcacatgatgtcgtc
gcgctggttcggcgtttcatcggcatcaagcgtgtcggtcacaccggcacacttgacccc
ttcgctaccggcttactcgttctctgcctagggccggccacccggctctcacggtttctg
accgatacctcaaaaagctatcgagcggttcttcgatttggttttgctacggatacccaa
gacctgaccggacaaccgctcacaccaccgcgcgccacccaaggcctgaccgaagaccag
ttgcaagccgtcgcgcagacgttcctgggcaagcaaatgcagacaccgccaatgtattcg
gccagaaaaattgacggggtggcgctctatcaactcgcgcgcgccggcaaagtggtcgtc
cgggcagcgacgccgattgaagtgtttagtttcaacttcttgcctgacgcccaggggcgc
gtcattcggcaggaccaacagggcgcacccatcgtggaatgcgaggtcacatgctcatcg
ggaacgtatatccgtacccttgcgcacgacattggcgaacgcatcggctgtggcgcacac
ttggtcgcccttcgacgaacagccgtagatggcttcaccgttgacgaggcactgaccctc
gaagacctgcaacggtgtgtcatgagcggcgaatggtcgggacaagtgctatcgcccctt
gatctcctgcggggctggccgcgcgtccgactcggtcaaccgctggcgaaccggtttatc
tgtgggcaggcgctggacatctcgccagatgacattacgcctgacaaccgccgcccattt
cctgttgccccagaagtaggcgtcgccgtcacggatgaagccggatactttctaggcgtg
ggacgctatgaccaccggacgggttggcttcgtccgcaaacggtgatgcccacggcacat
tga
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