Chloracidobacterium validum: J8C06_09615
Help
Entry
J8C06_09615 CDS
T07355
Name
(GenBank) RHS repeat protein
Organism
cvl
Chloracidobacterium validum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Big_2
Motif
Other DBs
NCBI-ProteinID:
QUW02594
LinkDB
All DBs
Position
1:2292238..2297982
Genome browser
AA seq
1914 aa
AA seq
DB search
MLRHAVTPIVHGFLIAGAPIAAQLVMSLQSLGQCAARLRGLRLWSFRLLCGVLSGLLVMG
SLPVGVLAQGRGGVRPDDLRYPYRGVPLNLPSTPPMQAAPMHPTPSRAELLARVQALDVP
YARGVIGVGQVGAMLTTVVGAREWFTAVPRDAAGGVVNGLAPVWRSSDATVVRVTAQGLA
EMRAPGRAEVTGQVGTVTVTVTVIVERGGRRMGEPVAWLKRSGRVVPAVWRREPWAGERS
AVGGTEGSSLGLVRKLTTGQGGGWQYSPDDPLPDEVTGQLFEARNTVGTPVGRVVPGGGR
SATGSAETNGNANYAFGMPLVELPGRGDVSLAVGLSYNSAVWAATDEWSGSVLTSVLTYD
PDVAYPAPGFRLGYGHVEDKGAQLVQVTGSGTRRGFRFERTDGSAEVWAAQDGSFDRVVV
YARSGDGQITSAVVQSTSGVELGLGARAGDRLYVTGVADRHGNYLNVGYVNNAGPRLAYI
VDGLQRYVVFEYDEHGCLWRILAPDFGGAGQREVARLAYEPLTFGSGLFAAGRTVRHPAT
VRVLRAVLTPTDGQAGTYRGQQYAYTAYGQVWRVRNVIGVNVNAPVASGTEVAWTAYNYP
QAAAGLSGMPKYTARTENWIGRAAGANGVVTTQYAEREQWDGGRLYRVTQVTQPDGAMLE
TWQNVGTGYVERQRVLTGGVSRTETRTTWEVVEGNPRVTEVQVGTETGESNGVLEWRRVA
YAYGAFNTVTEVREYGYGGELLRRTATSYVTDSGYTGRQLVRLPSQVDVFDGATGRHVAR
TEWTYDEGALVACPGIEGMQHRVDYNPYHPGYVAATAKRGNVTRVTRRARPGLVSENDEV
TTASYDVAGNVRVQSVGCCRQVEAVYGEGTKYTYATTVKRGAVGQLETQRAYDLASGLVV
SETDANGQVTQYAYQAVSLRWLRTLWADGGEVRATYYDAHVWEYAGRAVLLGQVERKVAS
GQFVLTLRLTDGRGGAVRTATHTPDGWLVEDVEYDGLGRWWREDAPYYTETWAAQVGKAN
QWTTVTVYDNLSRARVTQAPDGGTVRLDYAGRWTTVTDGVQRSRRWATDALGRVVVVEEP
DAVSGAFTGQQTEYRYDVLGHLVAVEQGVQRRYFRYDGIGRMTHARHPEMSAPHGFSDAQ
TGNGQWSEVTSYDQRGLVVSRVDGRGVTTSYSYDGLNRVVQIGYSDGTPAKRFVYGDAPV
GGATPPANGRGRLMWAVTEGGHPDQQMWLAVESYDAVGRVTSQVQRYKNAAGTDWDYENE
YRVGRSYNVGGQVVSETYPSGRVVTTGYDSVGRVAHVEGTLGGVSRTYVSGLQYTARQAV
TREALGTGTVQWRNYRYDALGRLVDLRVGSEDAAWGRNQGAWQWSWSVAGQATSHRTFVP
LDEAAAVSEVYREQYTYDRLGRLKRVEGDAHQLSGPWWAPVETNQRGQYVQENEYDRYGN
RTVGTGSWGLSGKAYVVDAQTNRLGVPAGEAGEMVYDGAGQLVRDTYTRGGVGDGQREYD
AEGRVVAAQVSGGVWERSSYDAYGRRVRVRLEGSGETRYVYGIGGEVLAEYGGGVSGASA
PRVEYGYRFGEVVVEARGSEVVWRVSDVVGSTRAVVDGSGHFGGTRRLDYAPFGEELVTQ
GGRSAAQGYAPTSTTHRYTGHERDMASGYDHTLYRKLDSRQGRWTRPDPYLGSAEVGHPQ
SWNRYAYVNNDPVNAMDPLGLHSLFIVDSMTVYGNLNSHFIWYGAAFSHETRLFVEADIG
VVAGGSDGGWFSDPNRNLDWLQTGLDICGMVPAVGEPFDAVNALISLLRGDIAGAGFSAG
AMVPWLGIGATVLKWLKKADKASQAATCAVKAGGSKVDDLVRQIDQSGAKVKLNPKTTNQ
EGNVTLDFGQQGRVNLRIETHPLTPGGPPVRHANIETVRQVGSKKVTKNIHITE
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcacgccgtcacaccgattgtccacggtttccttatcgctggtgcgcccatc
gcggcacagcttgtcatgtcactccaaagccttggtcaatgcgcggcgcgcctgcggggt
ctgcgtctgtggagtttccggctgctgtgcggcgtcctgagcgggctgctggtgatgggc
agtctgccggtgggcgtcctggcccaggggaggggtggggttcgccccgatgacctgcgc
tacccgtaccggggcgtcccgctcaacctgccctcgacgccgccgatgcaggctgcgccg
atgcatccgacgccaagccgggcggagttgctggcgcgggtgcaggcgctggatgtgccg
tatgcgcggggcgtgattggcgttggacaggtgggcgcgatgctgacgacggtggttggc
gcgcgggagtggttcaccgccgtgccgcgcgatgcggctgggggcgtcgtgaacgggttg
gccccggtgtggcggtcgtcagacgcgacggtggtgcgggtcacagcacaggggttggcg
gagatgcgtgcgcctggtcgggcggaagtgaccgggcaggttgggacggtgacggtgacg
gtgacggtgatagtggagcgcggtgggcggcggatgggcgagccggtggcgtggttgaag
cggtcggggcgggtggtgccggccgtgtggcggcgtgagccgtgggctggcgagcggtcg
gcggtcggtgggacagagggcagtagtttagggttggtcaggaagctgacgacggggcag
ggtggtgggtggcagtacagcccggatgatccgctgccggacgaggtgacgggacagtta
tttgaggcgcgcaacacggtcgggactccggtggggcgggtggtgccgggaggcgggcgg
tccgcgaccgggagcgcggaaaccaacgggaacgccaactatgcgtttgggatgccgctg
gtggagttgcctgggcggggagacgtcagcctggcggttgggctcagctacaacagtgcc
gtgtgggcggcgacggacgaatggagcgggtcggtactgacgtcggtactgacgtacgat
ccggacgtggcctaccccgcgcctgggtttcggcttgggtacggtcacgtcgaagacaaa
ggggcgcagttggtgcaggtgacggggagcgggacacggcgggggtttcggtttgagcgg
acggatgggagcgcggaggtgtgggcggcccaggatgggagctttgaccgggtggtggtg
tatgcccggagtggtgatgggcaaattacctcggcggtggtgcagagcacgagcggggtg
gaacttgggcttggcgcgcgggctggggatcggctgtatgtaaccggggtggcggatcgg
cacgggaactacctcaacgttgggtatgtcaacaacgccgggccgcgactggcatacatc
gtggacgggctgcagcggtacgtggtgtttgaatatgacgagcatgggtgtctgtggcgg
atactcgcgccggactttgggggcgctggacagcgggaagtggcgcggttggcgtacgaa
ccactgacgtttgggagcggtttgtttgcggctgggcggacggtacggcatccggcgacg
gtacgggtgctgcgggcggtactaaccccgaccgatgggcaggctgggacgtatcgcggg
cagcagtatgcctacaccgcctacgggcaggtgtggcgggtgcggaacgtgattggggtg
aatgtgaacgcgccggtcgcgagtgggacggaggtagcgtggacggcctacaactacccg
caggcggcggctgggttgagcgggatgccgaagtacacggcacggacggagaactggatt
ggacgggcggctggagcgaacggggtggtgacaacgcagtatgcggaacgtgagcagtgg
gatggtgggcgactgtaccgggtgacgcaggtgacacagccggatggggcgatgctggag
acatggcagaacgttgggacggggtatgtggagcggcagcgggtactgacgggtggggtg
tcccggacggaaacgcgaaccacgtgggaagtggtggagggcaatccgcgggtcacggag
gtgcaggttgggacggagactggggaaagcaacggggtgctggaatggcggcgggtggcg
tatgcgtacggggcgttcaacaccgtgacggaggtgcgggagtacggatatgggggcgag
ttgctgcgccggacggcgacgagttacgtgacggacagcgggtacacggggcggcagttg
gtgcgcttaccgagtcaggtggatgtgtttgacggggcaacagggcggcacgtggcacgg
acagagtggacgtacgacgaaggggcgttggtggcttgccctggaatcgaggggatgcag
caccgggtggactacaacccttatcacccggggtatgtggctgcaacggccaagcgcggg
aatgtgacacgggtgacccggcgggcgcggcctgggctggtgagcgaaaacgatgaggtg
acaacggcgagttatgacgtggccgggaatgtacgggtgcagtcggttgggtgctgtcgg
caggtggaggcggtgtatggggaggggacgaagtacacgtacgcgacgacggtgaagcgg
ggtgccgttgggcaattggagacgcagcgggcgtacgacttggcgagtgggctggtggtg
agcgagacggatgccaacggacaggtgacgcagtatgcgtatcaggcggtatcgctgcgg
tggctgcggacgctgtgggcggatgggggcgaggtgcgggcgacgtattacgatgcccat
gtgtgggagtatgcggggcgcgcggtgctgctggggcaggtggagcggaaggttgcgagc
ggacagtttgtgctcacgctgaggttgacggacggacgtgggggtgcggtgcggacggcg
acacatacgccggatgggtggctggtggaggatgtggagtacgatgggcttgggcggtgg
tggcgagaggatgcgccgtactacacagagacgtgggcggcgcaggttgggaaggcaaat
cagtggacgacggtgacggtgtacgacaacctgagtcgggcgcgcgtgacgcaggcgcca
gacggggggacggtgcggctggattatgcggggcggtggacgacggtgacggatggggtg
cagcggtcacggcgatgggcgacggacgcgctggggcgggtcgtggtggtagaagagccg
gatgcggtgagtggagcgtttacggggcagcagaccgagtatcgctacgacgtgctgggg
catctggtggcggtggagcagggggtacagcggcggtattttcggtatgacgggattggg
cggatgacgcatgcgaggcatccggagatgagtgcgccgcacggtttcagtgatgcgcag
acggggaatgggcagtggtccgaggtaacgagctatgaccagcggggtctggtggtgagc
cgggtggatgggcgcggggtgacgacgagctacagctatgacgggctgaatcgggtggtg
cagattgggtacagcgacgggacgccggcaaagcggtttgtgtatggggacgcgccggta
ggcggggcgacgccaccggcgaacgggcgtgggcggctgatgtgggcggtgacggagggc
gggcatccagatcagcagatgtggctggcggtggagagctacgacgcggtagggcgggtg
acgagtcaggtgcagcggtacaagaacgcggctgggacagattgggattatgagaatgag
tatcgggtggggcggagctacaacgtaggtgggcaggtggtgagtgagacgtatccgagc
ggccgggtggtgacgacggggtatgacagtgtggggcgggtggcgcatgtggaagggacg
ctggggggcgtgagtcggacgtatgtgagcgggcttcagtacacggcgcggcaggcggtg
acgcgggaggcgctggggacggggacggtgcagtggcggaattaccgctacgacgcgctg
gggcggttggtggacctgcgggtagggagcgaggatgcggcgtggggacggaatcagggg
gcgtggcagtggagttggtcggtggctgggcaagcaacgagccaccggacgtttgtgccg
ctggacgaggcggcggcggtgtcggaggtctatcgggagcagtacacgtatgatcggctt
gggcggctgaagcgggtggagggcgatgcgcatcagttgagtgggccgtggtgggcgccg
gtggagacaaaccagcgggggcagtatgtgcaggagaacgagtacgaccggtatgggaac
cggacggtggggactgggagttggggtctgagtgggaaggcgtacgtggtggacgcacag
acgaaccggcttggggttccggcgggcgaggctggggagatggtgtacgacggggctggg
cagttggtgcgggacacgtacacccggggcggggttggggatggacagcgggagtatgac
gccgaggggcgggtggtggcagcgcaggttagtggtggggtgtgggaaaggagcagctac
gatgcgtatggcaggcgggtacgggtgcggctggaggggagtggggagacgaggtatgtg
tatgggattgggggcgaagtgttggcggagtatggaggtggggtgagtggggcgagcgcg
ccgcgtgtggagtacgggtatcggtttggggaagtggtggtggaagcgcgtgggagtgag
gtggtgtggcgtgtgagcgatgtggtggggagtacgcgggcggtcgtggacgggagcggg
cattttggcgggacgcggcgactggattatgcgccgtttggggaggagttggtaacgcag
ggtgggcggagtgcggcgcaagggtatgcgccgacgagtacgacgcaccggtacacgggt
cacgagcgggatatggcgagcgggtacgaccacacgctgtaccggaagctggatagtcgg
caagggcggtggacgaggcctgacccgtaccttgggagcgcggaggttgggcatccgcag
agctggaatcggtatgcctatgtgaacaatgaccccgtcaacgccatggacccactgggg
ttgcatagcttgttcatcgtcgattccatgacggtgtacggaaacctcaatagccatttc
atttggtatggggcggcatttagtcatgaaacgaggctgtttgtggaagccgacattggg
gttgtggctggaggcagtgatgggggctggttttctgatccgaatcggaatctggattgg
ttgcagacggggttagacatttgtggtatggttccggcggtcggggaaccgtttgacgcg
gtgaacgcgctgatcagcctcctgcgtggcgacatagccggggcggggttctcggctggg
gcgatggtcccgtggctcgggatcggggcgaccgtgctaaagtggctcaagaaagccgac
aaggcgagtcaggctgcaacctgcgccgtaaaggcgggagggtcaaaggttgatgatcta
gttcggcagatcgatcagtcaggcgccaaggttaagctgaatcccaagaccacgaatcag
gagggcaacgttacactggattttggtcaacaggggcgcgtgaaccttcgtatcgagacc
catcctttgactcctggtggaccaccggtccggcatgccaacatagaaaccgtcagacag
gttggttccaaaaaagtcaccaagaatattcacatcacggagtga
DBGET
integrated database retrieval system
